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Name : pilQ_3 (HDEF_1350) Accession : YP_002924139.1 Strain : Candidatus Hamiltonella defensa T5A Genome accession: NC_012751 Putative virulence/resistance : Virulence Product : PilQ type IV pilus biogenesis protein ATPase Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1256463 - 1257971 bp Length : 1509 bp Strand : + Note : - DNA sequence : ATGTTCAATGCGCTTCCGCAGCCCGATGCCGATATCGCCCGCTTTGTGCGGGTGACCCAGGCTGAGGACGGCATGATTGA TATGGTGATCGCGGACAATTACCGCGAAGATTTCAAGGTTCAGCACTTTGTCAGCCGGGTACAGAAAGCCTTTCCTGGGC GTACCCGATGGGTCAGCCTGTCGCTGGATGACATCGCCCACGCAGCCCTCCCGCCATCGGGGGATGCCCCGGCACACAGC GTCAACCAGCAGCGGGTATCAGGCTACTTCCGCAAGGCCATTGCTCTATCGGCGTCTGACGTGCATTTGACTGTCGGACG CGATGGCGGTGAGTTTTGCTATGTGGAAGCGCGGGTGCACGGTGAACTGCACTGTCTGGACTGCATCGACAAGGACGAAG GGATGGCGCTGGCGTCCACCATTATTCTGTCGATGTGTGATGTCACCGAGAAACAGTTTTACCCCCATCTTCATCAGGAT GGCCGTATCGCTGAACGGTTTTTAAAGCCGCTGGGCATATTTGGTGCCCGCTATGCGCATATGCCTGCTGTCGGCGGGCT GTATGTGGTGATGCGTCTGATTCAGGAGGAGGGCGAGGCCGTCCCGGATTTTGAATCATTGGGCTTTTTGCCCGATCAAG TCCGGGTACTCAAACGCCTGTTGCGCCGTCCCGAAGGCATGATCATTTTATCCGGTCCCACTGGCTCCGGGAAATCCACC ACGCTCCGCACCGCCTCCGCCGCCTGGCTTGCGCTATGGGGCTATATCAACAGGTTACCGGTACGGAGACTGTTAACCAT TGAAGACTCACCCGAAGGCCGTATTGATGGCGCCATTCAGACGCCGATCATTGCGGACAAGAAAAATCCCGAAGACATCA AACGCGCATGGCGGCTATCGATGGCGTATGCCTTGCGCTGTGATCCGGATGCCATTTTAAACGGTGAAATCCGCGATCTG GAATCCGCTCTTACCGCCCTGAAAGCGGCCATGACCGGTCATCTGGTGATGACGACCCTGCACGCCAATGATGGCCTGAA TATCCTTGAGCGACTGGAAATAGAAGGGGTATCCGCCGGGCTACTGGCCGATCCGCAGTTGTTAATTGGGCTGATCAGTC AACGTCTGGTACAGCGTTTATGCCCGCACTGCAAAGTCCCTTATCAGCGGGTAGCCGGGCAGCTTGAGGCAGACGATCGC AATCTGATTGAACACCACTGTCAGCCTGAAAAGGTGTTTATGCGCCATGTGGAAGGCTGCGAACACTGTTATCACGGGAT TGTTGGGCGGATGGTGGTGGCTGAAGTGATTGCCCCGGATGCCCCCTTTTTTGAACTGTACCGGACAAAAAGCAGGGCGG CCGCGAAAACCTACTGGCATCGTAAACTGGGTGGTATTACGCGTAATCAGCACGTTTTGAACTACATCCATGCAGGAGAA GTGGACCCACTGGCCGCCCATTGTGTTTGTCCCATCGATGAAGACAGTTATACGTTGTTAGCCCTATAA Protein sequence : MFNALPQPDADIARFVRVTQAEDGMIDMVIADNYREDFKVQHFVSRVQKAFPGRTRWVSLSLDDIAHAALPPSGDAPAHS VNQQRVSGYFRKAIALSASDVHLTVGRDGGEFCYVEARVHGELHCLDCIDKDEGMALASTIILSMCDVTEKQFYPHLHQD GRIAERFLKPLGIFGARYAHMPAVGGLYVVMRLIQEEGEAVPDFESLGFLPDQVRVLKRLLRRPEGMIILSGPTGSGKST TLRTASAAWLALWGYINRLPVRRLLTIEDSPEGRIDGAIQTPIIADKKNPEDIKRAWRLSMAYALRCDPDAILNGEIRDL ESALTALKAAMTGHLVMTTLHANDGLNILERLEIEGVSAGLLADPQLLIGLISQRLVQRLCPHCKVPYQRVAGQLEADDR NLIEHHCQPEKVFMRHVEGCEHCYHGIVGRMVVAEVIAPDAPFFELYRTKSRAAAKTYWHRKLGGITRNQHVLNYIHAGE VDPLAAHCVCPIDEDSYTLLAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YE3502 | YP_001007663.1 | putative type IV pilus protein | Virulence | YAPI | Protein | 4e-95 | 48 |
| YpsIP31758_3731 | YP_001402685.1 | type IV secretion system protein | Virulence | YAPI | Protein | 2e-97 | 48 |
| pilQ | CAF28490.1 | putative ATP binding protein | Virulence | YAPI | Protein | 3e-95 | 48 |
| pilQ | NP_458633.1 | nucleotide-binding protein | Virulence | SPI-7 | Protein | 1e-92 | 45 |
| pilQ | NP_807844.1 | nucleotide-binding protein | Virulence | SPI-7 | Protein | 1e-92 | 45 |
| pilQ | AAF14817.2 | PilQ | Virulence | SPI-7 | Protein | 1e-92 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pilQ_3 | YP_002924139.1 | PilQ type IV pilus biogenesis protein ATPase | VFG2313 | Protein | 2e-95 | 48 |
