Gene Information

Name : HDEF_1336 (HDEF_1336)
Accession : YP_002924125.1
Strain : Candidatus Hamiltonella defensa T5A
Genome accession: NC_012751
Putative virulence/resistance : Unknown
Product : Tn5501-like resolvase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 1243835 - 1244431 bp
Length : 597 bp
Strand : -
Note : COG1961

DNA sequence : 
ATGTTGATTGGCTACATGCGCGTTTCGTCAGATTCCGATCGCCAGAGTACAGATTTGCAGCGTGATGCGCTGATCTCCGC
CGGTATCGATCCGCGTCACTTGTTCGAAGATCACGCTTCCGGCGCAAAGGATGAGCGCGTTGGCTTGTCGCAGGCGCTCG
AATTCGTCCGTGCGGGTGACGTGTTAGTCGTGTGGAAGCTCGATCGGCTCGATCGGCTTGGTCGCTCGCTGTCACACCTA
CTCAGCATCGTGACTTCACTCAAGGACAAACGGGTGGCATTTCGTTCGCTGACGGAAAACCTGGATACTACGACGCCCTC
GGGCGAATTCTTGTTTCAGGTGTTCGGCGCTCTGGCGCAGTACGAGCGTGCCTTGATCCGGGAGCGCGTTACCGCCGGCC
TGGCCGCCGCCCGAAAACGGGGGCGAATCGGCGGACGACCGAAGGCGATCACTGGAGAGAAGCTGGACGCTATCGTTGTC
GCACTGGACGGTGGCATGTCCAAAGCAGCGGTGTGTCGCAACTTCAATGTCAAGCGGTCTACCCTGATCGAAACTTTGGC
GCGGGCGATGACAAGTGGAAATGCGGAAAAACAATGA

Protein sequence : 
MLIGYMRVSSDSDRQSTDLQRDALISAGIDPRHLFEDHASGAKDERVGLSQALEFVRAGDVLVVWKLDRLDRLGRSLSHL
LSIVTSLKDKRVAFRSLTENLDTTTPSGEFLFQVFGALAQYERALIRERVTAGLAAARKRGRIGGRPKAITGEKLDAIVV
ALDGGMSKAAVCRNFNVKRSTLIETLARAMTSGNAEKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDBH8_0918 YP_005160010.1 transposase-like protein Not tested Not named Protein 3e-19 48
res AGF34985.1 resolvase Not tested SGI1 Protein 3e-18 44
res AGF35025.1 resolvase Not tested SGI1 Protein 3e-18 44
res AGF35059.1 resolvase Not tested SGI1 Protein 3e-18 44
res AGK06929.1 resolvase Not tested SGI1 Protein 3e-18 44
res AGK06966.1 resolvase Not tested SGI1 Protein 3e-18 44
res AGK07012.1 resolvase Not tested SGI1 Protein 3e-18 44
res AGK07070.1 resolvase Not tested SGI1 Protein 3e-18 44
res AAK02044.1 resolvase Not tested SGI1 Protein 3e-18 44
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 3e-18 44