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Name : serS (HDEF_1279) Accession : YP_002924079.1 Strain : Candidatus Hamiltonella defensa T5A Genome accession: NC_012751 Putative virulence/resistance : Unknown Product : serine tRNA synthetase; also charges selenocystein tRNA with serine Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 1180548 - 1181840 bp Length : 1293 bp Strand : + Note : COG0172 DNA sequence : ATGCTTGATCCCCATATTTTGCGTAAAGAGCCTCATACTGTTGCTGAAAAACTGGCTCGAAGATATTTTTCTCTCAACTT GAGCATGCTATTTGAGCAAGAACAACATCGAAAAATGCTACAGGTCAAAACAGAAGCACTTCAGGCAAAACGAAATTCAC TTTCAGCCTCTATCGCCGAAGGAAAAAAGAAAGGCGAAAACATTGATTCCCTTTACATTGAGGTCAATCAACTCAAAATT ACATTAGACAGTGCTCAAAAAGAGCTTGAAGAATTACAAAAAAAAATCCGGGCGTTTCAGCTTTCTCTTCCTAATTTACC TGATGATTCGGTACCCGAAGGTAAAAATGAAGAAGATAATCAAGAAATCATGCGATGGGGCCAACCAAAAAAATATTCTT TTCCTGCGCTGGATCATGTCACGCTGGGTGAAAAATTAACAGGGCTTGATTTTGCTTCCGCCGCCCAGCTCGCCGGTAGT CGGTTTGTCGTGATGAAAGGGCCTATAGCCCGCCTGCACAGAGCACTTTCTCAATTTATGCTCGATTTACATACAAAGCA GAATGGCTATACGGAATTTTATGTGCCTTATTTTGTCAATCACGATAGCTTATTGGGCACAGGGCAGCTCCCCAAATTTG GCGAAGATTTATTTCATATAGAACCTCTGGGGTCAGACGATAAAAAGTACGCCTTGATACCGACTGCGGAAGTCCCTCTG ACCAATCTGGTACGCCAGCAAATTTTAGAAGAATCCTCATTGCCATTAAAAATGATGGCGCATACACCTTGTTTTCGTTC TGAAGCAGGTTCTTATGGGCGTGATACTCGCGGTTTAATACGAATGCATCAATTCGATAAAGTTGAATTAGTTCAAATTA CACGTCCAGAAGATTCAATGAGAGCATTAGAAGAACTGACAGAGCATGCCGAGCAGGTGCTGAAAAAACTGGAATTACCT TATCGAAAAATGTTGCTTTGTACAGGAGATATGGGATTTGGGGCGAAGAAAACCTATGATTTAGAAGTGTGGTTAGAAGG TCAGAAGACGTATCGAGAAATTTCTTCCTGTTCAAATATGGGTGATTTTCAGGCACGTCGAATGCAGACACGCTATAAAA CGGCATCAAAAAATTGTTTTGTTCATACCTTAAATGGATCCGGCCTGGCAGTGGGTCGTACTTTGGTCGCAGTGATGGAA AATTATCAACAGGAAAATGGCAGCATTGCAGTGCCACAGGTTTTGCAACCTTATATGGAAGGATTAGAGTATATAAAAAA TATCGAAAAATAA Protein sequence : MLDPHILRKEPHTVAEKLARRYFSLNLSMLFEQEQHRKMLQVKTEALQAKRNSLSASIAEGKKKGENIDSLYIEVNQLKI TLDSAQKELEELQKKIRAFQLSLPNLPDDSVPEGKNEEDNQEIMRWGQPKKYSFPALDHVTLGEKLTGLDFASAAQLAGS RFVVMKGPIARLHRALSQFMLDLHTKQNGYTEFYVPYFVNHDSLLGTGQLPKFGEDLFHIEPLGSDDKKYALIPTAEVPL TNLVRQQILEESSLPLKMMAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQITRPEDSMRALEELTEHAEQVLKKLELP YRKMLLCTGDMGFGAKKTYDLEVWLEGQKTYREISSCSNMGDFQARRMQTRYKTASKNCFVHTLNGSGLAVGRTLVAVME NYQQENGSIAVPQVLQPYMEGLEYIKNIEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-100 | 52 |
