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Name : prgK (HDEF_1216) Accession : YP_002924023.1 Strain : Candidatus Hamiltonella defensa T5A Genome accession: NC_012751 Putative virulence/resistance : Virulence Product : type III needle complex inner membrane lipoprotein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4669 EC number : - Position : 1129150 - 1129899 bp Length : 750 bp Strand : - Note : COG4669 DNA sequence : ATGAAGAGAATACGTTTCGTGATTTGTTTTTGCTTTATAGGGCTTTTAGTCGGCTGTAAAGAGCAGAATTTGCTCAAAGG GCTAGATCAACAACAAGCCAATGAGGTTTCTGCATTATTATTGCGTCATAATATTCCCGCTCAAAAAACAGACCAACTCA AAGAGGGGTATAGCATCAGTGTGAACCCTGAGGATTTTGTCGCTGCGGTAGGTTTAATTAAAACCTATAATTTACCTTCT AAACCGAGAGTCGAAATTTCTCAAATGTTTCCTGGCGATTCTTTGATTTCCTCTCCTCGACAAGAGAAAGCCCGTTTATA CTCGGGCATAGAACAGCGGCTTGAACAATCATTACAAAGCATGAGGGGCATTGTGACAGCCAGGGTTCATGTGAGCTATG ACCTTGATTCAGGAGAAGGGGGTCGCAAAACGCCGGCCATACATCTATCTTCATTAGTGAATCACGATCAAGGGATGGAT ACCAGCTTGTTAATTGGGGATGTCAAACGTTTTTTGAAAAACAGTTTCAATGATTTGGATTATGAAAACATTTCAGTGAT TCTGTCAGAACAAGCCCCAATGCAGCACCAGGCGCCCGTTCAAAAAGCAGCTCAAGTTAATTACAGCTTGATTTATACGA TGATGGCGTTGCTTTTTTTGATAAGCAGTTTTTTATTATTTACAAAATTCTCCTTCTTAAGAGAAAAGATAGAAAATTTT GTCTCTAAAAGTAAGGAAAATAAAAAATAG Protein sequence : MKRIRFVICFCFIGLLVGCKEQNLLKGLDQQQANEVSALLLRHNIPAQKTDQLKEGYSISVNPEDFVAAVGLIKTYNLPS KPRVEISQMFPGDSLISSPRQEKARLYSGIEQRLEQSLQSMRGIVTARVHVSYDLDSGEGGRKTPAIHLSSLVNHDQGMD TSLLIGDVKRFLKNSFNDLDYENISVILSEQAPMQHQAPVQKAAQVNYSLIYTMMALLFLISSFLLFTKFSFLREKIENF VSKSKENKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| prgK | AAS66872.1 | PrgK | Virulence | SSR-2 | Protein | 5e-58 | 60 |
| ECs3716 | NP_311743.1 | EprK | Not tested | LIM | Protein | 2e-50 | 59 |
| eprK | AAZ31284.1 | EprK | Virulence | ETT2 | Protein | 4e-49 | 58 |
| prgK | YP_217790.1 | cell invasion protein | Virulence | SPI-1 | Protein | 1e-55 | 57 |
| prgK | NP_461792.1 | needle complex inner membrane lipoprotein | Virulence | SPI-1 | Protein | 1e-55 | 57 |
| prgK | NP_457265.1 | pathogenicity 1 island effector protein | Virulence | SPI-1 | Protein | 1e-55 | 57 |
| prgK | NP_806474.1 | pathogenicity island 1 effector protein | Virulence | SPI-1 | Protein | 1e-55 | 57 |
| ysaJ | AAS66833.1 | YsaJ | Not tested | SSR-1 | Protein | 9e-38 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| prgK | YP_002924023.1 | type III needle complex inner membrane lipoprotein | VFG0533 | Protein | 6e-56 | 57 |
| prgK | YP_002924023.1 | type III needle complex inner membrane lipoprotein | VFG1787 | Protein | 1e-36 | 45 |
