Gene Information

Name : tpx (HDEF_0120)
Accession : YP_002923041.1
Strain : Candidatus Hamiltonella defensa T5A
Genome accession: NC_012751
Putative virulence/resistance : Virulence
Product : thiol peroxidase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 123065 - 123574 bp
Length : 510 bp
Strand : -
Note : COG2077

DNA sequence : 
ATGACACAAACAGTATTATTTCAGGGAAAAGAAACCAGGGTTTCAGGAAAATTTCTTGAACCAGGTAATAAGGCCCCTTC
TTTCAAACTGGTTGGAAAAAATTTATCAGAACATTCACTCAGTGATTTTGCAGGAAAGAATAAGATCCTGAATATTTTTC
CAAGCATTGATACGGGGGTATGTGCTGCTTCAGTACGTCGATTTAATGAATCAGCGGCGGAACTCCGCAATACTGTTGTT
CTCTGTATTTCTGCTGATCTTCCTTTTGCTCAATCTCGATTTTGTGGTGCTGAAAATTTAAACAATGTCATTACCCTGTC
TGCTTTTCGCGATAACAGTTTTAAGCACGCTTATGGCGTCGACATATCCGAAGGGATGTTAAAGGGATTAACGGCAAGGG
CTGTATTAGTGCTCAATCAGCAAGATGAAATTGTTTATAGTGAGCTGGTGAGCGAAATGACTACTGAGCCTAATTACGAA
GCTGCTTTGGATGCGTTAAAAAAACTGTAA

Protein sequence : 
MTQTVLFQGKETRVSGKFLEPGNKAPSFKLVGKNLSEHSLSDFAGKNKILNIFPSIDTGVCAASVRRFNESAAELRNTVV
LCISADLPFAQSRFCGAENLNNVITLSAFRDNSFKHAYGVDISEGMLKGLTARAVLVLNQQDEIVYSELVSEMTTEPNYE
AALDALKKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 1e-33 47
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 8e-34 47
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 2e-33 46
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 1e-33 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tpx YP_002923041.1 thiol peroxidase VFG0087 Protein 3e-34 47