Gene Information

Name : HDEF_0119 (HDEF_0119)
Accession : YP_002923040.1
Strain : Candidatus Hamiltonella defensa T5A
Genome accession: NC_012751
Putative virulence/resistance : Resistance
Product : integral membrane protein, tellurite resistance TerC family
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0861
EC number : -
Position : 120888 - 121910 bp
Length : 1023 bp
Strand : +
Note : COG0861

DNA sequence : 
ATGGAACCTTTGACTATTGGTTTTCCTCCAAAAACGCTCATCGTATTCGTCACATTATCTGTACTTGCTATTTTTATAGA
TTTGTTTATGCACAGAAATAATAAGCCTATTTCACTTAAAAGTGCTTGTTTTTGGTCGCTTTTCTGGGTTGGAATTGCCT
TTGTTTTTGCGGGCTTTCTATACTTATCCCATGGCCAGGAATTGGCGACTTTATTTATCACTGGATACACTTTAGAAAAA
GTACTATCTATCGATAATTTATTTGTGATTATGGCTATTTTTGCCTGGTTTGCAGTCCCTGATAACGATAAGTTACGTGT
TCTGTATTGGGGGGTAATTGGGGCCATTATTTTTAGGGCGATTTTTGTTGCCATAGGAACCAGTCTGTTATCCTTGGGGC
CTTGGATAGAATTTATATTTGCCGGTATTGTTGGTTGGACAGCCATCATGATGCTTAAAGATAAAAAAAATCAACAGCAG
ATTGAAGATTACTCTCAACATTTTGCTTATCGTCTGGTGAAGCGGTTTTTTCCTATATGGCCTAGACTCAAGGGCTCGGC
GTTTTTATTAACAGGAAATGAAGTCAAGAAAGAATTAAAAAAGCCAGAAAACAGCGATATTAAGATTGAGCAATTTAGAA
ACAGTGCACTTTATGCAACTCCATTAATGTTGTGTTTGGCCGTTATTGAACTTTCTGATGTGATATTTGCATTTGATTCT
GTACCCGCTGTGATCGCTGTCAGTCGTGATCCTGTCATTATTTATAGTGCCATGGTCTTTGCCATACTGGGTTTAAGAAC
CTTGTATTTTGTGCTCGAAGCAATGAAACAGTGTTTAATCCATCTGGAAAAATCTGTGATTGCGTTATTATTTTTTATTG
CCATAAAACTGGCTTTAAATGCTTCAGAGCATATTTTCCATCATGGCTATCATATTTCATGGCCAACCAGCTTATTGATC
GTGATAGTAGTATTGATGCTTGGAATTATAGCCAGCTTTTTATTTCCTAAAAACTCAGAGTGA

Protein sequence : 
MEPLTIGFPPKTLIVFVTLSVLAIFIDLFMHRNNKPISLKSACFWSLFWVGIAFVFAGFLYLSHGQELATLFITGYTLEK
VLSIDNLFVIMAIFAWFAVPDNDKLRVLYWGVIGAIIFRAIFVAIGTSLLSLGPWIEFIFAGIVGWTAIMMLKDKKNQQQ
IEDYSQHFAYRLVKRFFPIWPRLKGSAFLLTGNEVKKELKKPENSDIKIEQFRNSALYATPLMLCLAVIELSDVIFAFDS
VPAVIAVSRDPVIIYSAMVFAILGLRTLYFVLEAMKQCLIHLEKSVIALLFFIAIKLALNASEHIFHHGYHISWPTSLLI
VIVVLMLGIIASFLFPKNSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
terC_2 NP_287117.1 phage inhibition, colicin resistance and tellurite resistance protein Not tested TAI Protein 2e-105 70
terC NP_286709.1 phage inhibition, colicin resistance and tellurite resistance protein Not tested TAI Protein 2e-105 70
unnamed ACY75543.1 tellurium-resistance protein Not tested Tn6060 Protein 1e-85 62

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HDEF_0119 YP_002923040.1 integral membrane protein, tellurite resistance TerC family BAC0388 Protein 8e-104 69