Gene Information

Name : HDEF_1046 (HDEF_1046)
Accession : -
Strain : Candidatus Hamiltonella defensa T5A
Genome accession: NC_012751
Putative virulence/resistance : Unknown
Product : -
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1015100 - 1015828 bp
Length : 729 bp
Strand : -
Note : IS26-like transposase, pseudogene; similar to COG3316; similar to GI 45332240

DNA sequence : 
TTGTTGCCGGAGGAGAAGCTGATGGCTCCTTTCCGTGGTCGTCATTTTGAACCTGAGGTCATTCTGTGGGCGGTACGCTG
TTACTGCAAACAGGGGATCAGCTACCGCGAGCTAAAGGAAATGCTGTCTGAGCGGGGGGGTCAAGGTTGCTCCCACCCCG
ATTTACCGTTGGGTTCAACGCTATGCCCCTGAAATAGAAAAGCGACTGCGGTGGTGCTGGCGTCACTCACCCTTCCGATC
TCTGCCCGTGGCCCATCGATGAAACGTACGTGAAGGTGAATGGCGGCTGGGCTTATCTTTACCGGGCTCTGGACAGCAGA
GGCCATACTCTCGACTTTTATCTTTCCCCTCGTCGTCACACTCAAGCCGCCTGGCGATTGTTGAGACAGATTTTAAATAA
CGTAAAGAAGTGGCCAATCCCTCGATGTATCAACACAGATAAGGCGCCGACATATCGCCGTGCCCTCGCCCTTCTAAAAA
GGGAGGGGCCGGTGCCCACCTAACCCTGAACACAGGCAGGTTAAATACCGAAACAACCTGATTGAATGCGACCATGGCAA
GTTGAAAAGGATCATCCGCGCCACGCTTGGGTTTAAATCCATGAAGACGGCTTACGCCACGATAAAGGGCATGGAAGTCA
TGCGTGCGCTGCGAAAAGGTCAGGCTGAATCATTTTATTTTGGTCATCCCTTGGGCGAAGGGCGTCTGGTAAGTCGAGTT
TTTGAAATT

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
IS26 CAJ77080.1 Insertion sequence Not tested AbaR1 DNA 6e-87 81.7
IS26 CAJ77074.1 Insertion sequence Not tested AbaR1 DNA 6e-87 81.7