Gene Information

Name : pulF (KP1_0988)
Accession : YP_002917871.1
Strain : Klebsiella pneumoniae NTUH-K2044
Genome accession: NC_012731
Putative virulence/resistance : Virulence
Product : pullulanase-specific type II secretion system component F
Function : -
COG functional category : N : Cell motility
COG ID : COG1459
EC number : -
Position : 965804 - 967018 bp
Length : 1215 bp
Strand : -
Note : internal ID: KP0988

DNA sequence :
ATGGCCCTGTTTCGCTATCAGGCGCTGGACGCGCAGGGCAAAACCCGCCGCGGCCTTCAGCAGGCCGACTCCGCCCGCCA
CGCCCGCCAGCTGCTGCGGGACAAGGGCTGGCTGGCGCTGGAAGTGACAACTGCCGACCCGGCGCGGCGACTGTGGGCCG
GCGGATCCCTTACCCGGCGTACCAGCGCCGGTGATTTAGCCCTGCTCACCCGCCAGCTGGCGACTCTGGTTGCCGCCGGG
ATCCCGCTGGAAAAGGCGCTCGATGCCGTCGCCCAGCAGTGCGAAAAGCCGTCGCTAAGAACGTTAATGGCCGGGGTGCG
CAGCAAAGTGCTCGAAGGCCACTCGCTGGCGGAGGCGATGCGCGCCTATCCCGCCTGCTTCGACGGGCTGTTCTGCGCCA
TGGTGGCGGCCGGCGAAACCTCCGGCCATCTCGACGGCGTACTGAACCGGCTTGCTGACTATACCGAGCAGCGCCAGCAG
CTCCGCGCCCGCCTGCTGCAGGCGATGATCTACCCCATCGTACTGACGCTGGTCGCTATCAGCGTGATCGCCATTCTGCT
CTCCACCGTGGTGCCGAAAGTCGTTGAGCAGTTTGTCCATCTTAAACAGGCCCTGCCCTTCTCTACCCGGCTGCTAATGA
GCCTGAGCGACATCGTGCGCAGCGCGGGCCCCTGGCTGGCGCTGCTGTCGTTACTGGCGCTGCTGGCGCTGCGCTATCTG
CTGCGCCAGCCTGCCCGGCGGCTCGCCTGGGACCGGGCGCTGCTGCGCCTGCCGGTCATCGGCCGCGTGGCCCGCAGCGT
CAACAGCGCGCGCTACGCCCGCACCTTAAGCATTCTCAATGCCAGCGCAGTGCCGCTGCTGCTGTCGATGCGCATCAGCG
CCGACGTCCTCAGCAACGCCTGGGCGCGCAGCCAGCTGGCGGCGGCCAGCGAATCGGTACGCGAAGGCGTTAGTCTGCAT
CGGGCGCTGGAATCCACCGCCCTGTTTCCGCCGATGATGCGCTACATGATCGCCAGCGGCGAACAGAGCGGCGAACTGAC
CGCCATGCTGGAGCGCGCGGCGGAGAACCAGGACCGGGAGCTGAGCGCGCAGATCCAGATGGCCCTCAGCCTGTTTGAGC
CTCTGCTGGTGGTCACCATGGCCGGCATGGTGCTGTTTATCGTGCTGGCCATCCTGCAGCCGATCCTGCAACTGAACACC
CTTATGAGTATGTAA

Protein sequence :
MALFRYQALDAQGKTRRGLQQADSARHARQLLRDKGWLALEVTTADPARRLWAGGSLTRRTSAGDLALLTRQLATLVAAG
IPLEKALDAVAQQCEKPSLRTLMAGVRSKVLEGHSLAEAMRAYPACFDGLFCAMVAAGETSGHLDGVLNRLADYTEQRQQ
LRARLLQAMIYPIVLTLVAISVIAILLSTVVPKVVEQFVHLKQALPFSTRLLMSLSDIVRSAGPWLALLSLLALLALRYL
LRQPARRLAWDRALLRLPVIGRVARSVNSARYARTLSILNASAVPLLLSMRISADVLSNAWARSQLAAASESVREGVSLH
RALESTALFPPMMRYMIASGEQSGELTAMLERAAENQDRELSAQIQMALSLFEPLLVVTMAGMVLFIVLAILQPILQLNT
LMSM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspF YP_854405.1 type II secretion protein GspF Not tested PAI I APEC-O1 Protein 5e-85 56
gspF CAE85232.1 GspF, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-84 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pulF YP_002917871.1 pullulanase-specific type II secretion system component F VFG2049 Protein 7e-81 56
pulF YP_002917871.1 pullulanase-specific type II secretion system component F VFG0181 Protein 1e-71 47
pulF YP_002917871.1 pullulanase-specific type II secretion system component F VFG1870 Protein 1e-70 43