Gene Information

Name : KP1_5380 (KP1_5380)
Accession : YP_002921868.1
Strain : Klebsiella pneumoniae NTUH-K2044
Genome accession: NC_012731
Putative virulence/resistance : Unknown
Product : phage integrase family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 5122188 - 5123363 bp
Length : 1176 bp
Strand : +
Note : internal ID: KP5380

DNA sequence :
ATGGCACTTACAGATATACAAATCAAACGAGCAAAGCCCCAAGAAAAGCCATATACATTGAACGATGGGCAAGGCCTGTC
GTTGCTTATCAACCCCGATGGCTCGAAGGGCTGGCGGTTCCGTTTCCGCCTTGCTGGGAAAGCGCGGTTAATGTCATTTG
GTAGCTACGACCTTGTGAGCCTCGCAGAAGCACGTGAGAAACGCGAGACGTCCCGTAAGCAGGTTGCAAATGGCATTGAC
CCCGTTGAGGAACGCAAATCACAAAAACTCGCTCAGAAGCTATCAACAGAAAACTCTTTCGAAGCCATATGTCGAGAATG
GCACACTAACAAAGCTGACCGCTGGACAGTGGCCTATCGCGAAGAAATCATTAAGACATTCGAGAAAGATGTGTTCCCGT
TCATTGGTAAACGCCCTAACAGTGAAATCAAGCCGTTAGAACTGCTTGAAGTATTGCGGCGAATAGAGAAGCGTGGAGCG
CTGGAGAAAACACGCAAAGTGCGCCAAAGATGTGGCGAGGTTTATCGATATGCAATTATAACTGGCCGCGCTGAATATAA
CCCAGCACCTGATTTAGCTATCGCCTTGGCCGTTCCTAAGCAGAAGCACCACCCTTTTTTATCTGCCGAAGAATTACCTC
ATTTTATTCGTGATCTGGAAGCGTACACCGGTAGCATCATCACCAAAAATGCTACAAAGATAATCATGCTAACTGGTGTA
AGAACGCAGGAGATGCGCTTTGCTACGGGGGATGAAATTGATTTAGAAAAGGCAATTTGGGAAATCCCAGCAGAACGGAT
GAAAATGCGTAGGCCGCATATTGTTCCTTTATCTACCCAGGTCATTGACCTCTTTAGGCAACTCAAGCCTATTACCGGTC
ATTATCCTTATATTTTTATCGGCAGAAAAAACCGCAGTAAGCCAATTTCGAAAGAAAGTGTCTCTCAAGTGATTGAGTTA
CTTGGCTACAAAGGCCGTGCCACAGGTCACGGATTCAGACATACAATGTCCACTATCCTGCATGAGCAGGGATTTGATAG
TGCATGGATTGAAATGCAATTAGCGCACGTTGATAAAAATAAAATTCGCGGCATTTACAATCATGCTCAATACATAGAAG
ATCGAACGAAAATGATGCAGTGGTATAGTGATCTTTTCACTGAGCCCAAAAGGTGA

Protein sequence :
MALTDIQIKRAKPQEKPYTLNDGQGLSLLINPDGSKGWRFRFRLAGKARLMSFGSYDLVSLAEAREKRETSRKQVANGID
PVEERKSQKLAQKLSTENSFEAICREWHTNKADRWTVAYREEIIKTFEKDVFPFIGKRPNSEIKPLELLEVLRRIEKRGA
LEKTRKVRQRCGEVYRYAIITGRAEYNPAPDLAIALAVPKQKHHPFLSAEELPHFIRDLEAYTGSIITKNATKIIMLTGV
RTQEMRFATGDEIDLEKAIWEIPAERMKMRRPHIVPLSTQVIDLFRQLKPITGHYPYIFIGRKNRSKPISKESVSQVIEL
LGYKGRATGHGFRHTMSTILHEQGFDSAWIEMQLAHVDKNKIRGIYNHAQYIEDRTKMMQWYSDLFTEPKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
int CAC39282.1 integrase Not tested LPA Protein 2e-138 71
aec33 AAW51716.1 Int Not tested AGI-3 Protein 9e-139 71
int AAC31482.1 CP4-like integrase Not tested LEE Protein 2e-137 70
int ACU09430.1 integrase Not tested LEE Protein 2e-137 70
intL NP_290239.1 integrase for prophage 933L and the LEE pathogenicity island Not tested LEE Protein 3e-137 70
ECs4534 NP_312561.1 integrase Not tested LEE Protein 3e-137 70
int AAD44730.1 Int Not tested SHI-2 Protein 2e-136 70
int AAD54663.1 Sai integrase Not tested SHI-2 Protein 7e-136 69
S4835 NP_839238.1 integrase Not tested SHI-2 Protein 9e-136 69
SF3698 NP_709437.1 integrase Not tested SHI-2 Protein 9e-136 69
ESA_03025 YP_001439090.1 hypothetical protein Not tested Not named Protein 7e-109 56
unnamed AFX83955.1 integrase Not tested SE-PAI Protein 3e-111 55
intA AAB00935.1 integrase A Not tested vap locus Protein 1e-57 41
int AAN62223.1 putative integrase Not tested PAGI-3(SG) Protein 4e-64 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KP1_5380 YP_002921868.1 phage integrase family protein VFG0783 Protein 1e-137 70
KP1_5380 YP_002921868.1 phage integrase family protein VFG0598 Protein 4e-136 69