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Name : fimD (KP1_4574) Accession : YP_002921140.1 Strain : Klebsiella pneumoniae NTUH-K2044 Genome accession: NC_012731 Putative virulence/resistance : Virulence Product : outer membrane protein for export and assembly of type 1 fimbriae Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 4382565 - 4385210 bp Length : 2646 bp Strand : + Note : internal ID: KP4574 DNA sequence : ATGACAGCCGGGCAACGTCGGACCGGAGGGATAATGTCACATCGGAAATATGGACTGGATCATTTAGGTTGCCGAACTGC CCGGCGCCTGGTATCTCCGGCGCTGGCGCTGTGGCTCTGCTCACAGCCGTTTGCCGCGCGGGCGGACCTCTATTTTAACC CCCGCTTTTTAGCTGACGATCCGGCGGCGGTGGCTGACCTGTCGGGATTTGAAAAAGGCCAGGAGGTTCCGCCAGGCACC TATCGCGTCGATATTTATCTCAACAATGGTTTTATGACCACCCGGGACGTCACTTTCCAGGCCGATGCCCAGGGTCACGG TCTGTCACCCTGCCTGACGCGCGGCCAGCTGGCGAGCATGGGTGTGGATACCGGTCGGGTGCCGGGCATGGCAACGCTGG ACAGCACGGCCTGCGTGCCGCTGACCACGCTTATCAGCGAAGCTACCACGCGCTTCGACGTCGGGCAGCAACGCCTGTAC CTCACCGTCCCCCAGGCATTTATGGGTAACCATGCGCGCGGCTATATTCCGCCGGAGCTGTGGGATAACGGTATCACCGC CGGGCTGATTAACTATAACTTCACGGGCAATAACGCCCATAACACCACAGGTGGCAGCAGCCGTTACGCCTATCTGAATC TACAGAGCGGCCTGAACATTGGCGCCTGGCGTCTGCGCGATAACAGCACCTGGAGCTACAGCAGCGGCGGTAGCACCTCA TCCAACGAGAATCGCTGGCAGCACGTTAACAGCTGGCTTGAGCGGGACATCACGCCTCTGCGTTCGCGACTCACCCTAGG GGACAGCTACACCAACGGCGATGTCTTCGACGGGATCAACTTCCGCGGCGCCCAGCTGGCCTCCGACGACAATATGCTAC CGGACAGCCAGAAAGGCTTTGCGCCGGTGATCCACGGGATCGCCCGCGGCACGGCGCAGGTGTCAATCAGGCAAAACGGC TACGAAATCTACCAGAGCACAGTGCCGCCGGGACCATTTACCATCGACGATCTCTACGCCGCGGGCAATGGCGGCGATCT GCAGGTCACGATCAAAGAAGCGGATGGCTCCCGCCAGGTCTTCAGCGTGCCCTGGTCAACGGTGCCGGTTCTCCAGCGTG AAGGCCATACCCGCTTCGCCCTCACCGCCGGGGAGTACCGCAGCGGCAACAGTCAGCAGGAAACGCCCGATTTTTTCCAG GGCACGGCCATGCATGGCCTGCCGGCAGGCTGGACGCTCTACGGCGGCACCCAGCTGGCAGACCGCTATCGCGCCTTTAA CCTTGGGGTGGGGAAAAACATGGGCTATTTCGGCGCCCTGTCGCTGGATATCACTCAGGCCAACGCCACCCTGGCTGACG ACAGCGAACATCAGGGGCAGTCGGTGCGTTTTCTCTATAACAAATCCCTGGATGAGACCGGCACCAACCTGCAGCTGGTG GGCTACCGCTACTCTACCCGCGGCTATTATAACTTTGCCGATACCACTTACCGCCGGATGAGCGGCTACAGTGTGGAAAC CCAGGACGGCGTTATCCAGGTAAAACCGAAATTTACCGACTACTACAATCTGGCTTACAGCAAGCGCGGCAAGGTGCAGC TGAGCGTGACTCAGCAGTTGGGGCGCACCGCCACCCTCTATCTCAGCGGTAGCCACCAGACCTACTGGGGCACCGACGAT GCCGATGAGCAGCTGCAGGCCGGCCTCAACGCCGCCGTGGACGATATCAACTGGTCGCTAAGCTACAGCCTGACAAAAAA CGCCTGGCAGCAGGGGCGCGATCAAATGCTGGCGATCAATATCAATATCCCCTTCAGCCACTGGCTGCGTTCCGACAGCC GCTCGGTCTGGCGGCACGCCAGCGCCAGCTACAGCCTGTCGCACGATCTCAATGGCCGCATGACCAATCTGGCGGGCCTG TACGGCACCCTGCTGGAAGACAACAACCTCAGCTATAGCGTGCAGACCGGCTATGCCGGCGGCGGCAACGGCGACAACGG GAGCACAGGCTACACCGCCCTCAACTACCGCGGCGGCTACGGCAACGCCAACGTCGGCTACAGCCGCAGCGATGGCTTTA AACAGCTCTACTACGGGGTCAGCGGCGGCGTGCTGGCGCACGCCAACGGCATCACCCTGAGCCAACCGTTAAACGATACC GTGGTGCTGGTGAAAGCCCCCGGCGCCGGCGGCGTGAAAGTGGAAAACCAGACCGGGGTACGCACCGACTGGCGCGGGTA TGCCGTCCTGCCTTATGCCACTGAGTATCGCGAAAACCGGATCGCGCTGGATACCAACACCCTGGCGGACAATGTCGACC TTGACGATGCGGTGGTCAGCGTGGTGCCCACCCATGGGGCGATTGTCCGCGCCAACTTCAACGCCCAGGTAGGGATGAAG ATCCTGATGACGCTGACCCATCGCGGCAAACCGGTGCCGTTTGGCGCCCTCGCCACCGGCGACAGCAACCAGAGCGGCAG CATCGTCGCGGACAACGGCCAGGTCTACCTGAGCGGGATGCCGCTGGCGGGCAAAGTGCGGGTGAAATGGGGCGATGGCC CGGACGCTCAGTGCGTGGCCGATTACCGTCTGCCGCCGGAGAGCCAGCAGCAGGCGCTCAGTCAGCTTTCGGTCGCGTGC CGCTAA Protein sequence : MTAGQRRTGGIMSHRKYGLDHLGCRTARRLVSPALALWLCSQPFAARADLYFNPRFLADDPAAVADLSGFEKGQEVPPGT YRVDIYLNNGFMTTRDVTFQADAQGHGLSPCLTRGQLASMGVDTGRVPGMATLDSTACVPLTTLISEATTRFDVGQQRLY LTVPQAFMGNHARGYIPPELWDNGITAGLINYNFTGNNAHNTTGGSSRYAYLNLQSGLNIGAWRLRDNSTWSYSSGGSTS SNENRWQHVNSWLERDITPLRSRLTLGDSYTNGDVFDGINFRGAQLASDDNMLPDSQKGFAPVIHGIARGTAQVSIRQNG YEIYQSTVPPGPFTIDDLYAAGNGGDLQVTIKEADGSRQVFSVPWSTVPVLQREGHTRFALTAGEYRSGNSQQETPDFFQ GTAMHGLPAGWTLYGGTQLADRYRAFNLGVGKNMGYFGALSLDITQANATLADDSEHQGQSVRFLYNKSLDETGTNLQLV GYRYSTRGYYNFADTTYRRMSGYSVETQDGVIQVKPKFTDYYNLAYSKRGKVQLSVTQQLGRTATLYLSGSHQTYWGTDD ADEQLQAGLNAAVDDINWSLSYSLTKNAWQQGRDQMLAININIPFSHWLRSDSRSVWRHASASYSLSHDLNGRMTNLAGL YGTLLEDNNLSYSVQTGYAGGGNGDNGSTGYTALNYRGGYGNANVGYSRSDGFKQLYYGVSGGVLAHANGITLSQPLNDT VVLVKAPGAGGVKVENQTGVRTDWRGYAVLPYATEYRENRIALDTNTLADNVDLDDAVVSVVPTHGAIVRANFNAQVGMK ILMTLTHRGKPVPFGALATGDSNQSGSIVADNGQVYLSGMPLAGKVRVKWGDGPDAQCVADYRLPPESQQQALSQLSVAC R |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fim2D | AFH78429.1 | putative fimbrial usher protein | Virulence | KpGI-5 | Protein | 0.0 | 81 |
| sfaF | CAC16953.2 | SfaF protein | Virulence | PAI III 536 | Protein | 0.0 | 67 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fimD | YP_002921140.1 | outer membrane protein for export and assembly of type 1 fimbriae | VFG0876 | Protein | 0.0 | 80 |
| fimD | YP_002921140.1 | outer membrane protein for export and assembly of type 1 fimbriae | VFG1645 | Protein | 0.0 | 67 |
| fimD | YP_002921140.1 | outer membrane protein for export and assembly of type 1 fimbriae | VFG0912 | Protein | 0.0 | 67 |
| fimD | YP_002921140.1 | outer membrane protein for export and assembly of type 1 fimbriae | VFG0446 | Protein | 1e-172 | 49 |
| fimD | YP_002921140.1 | outer membrane protein for export and assembly of type 1 fimbriae | VFG0454 | Protein | 4e-156 | 44 |
