|
Name : serS (KP1_1894) Accession : YP_002918688.1 Strain : Klebsiella pneumoniae NTUH-K2044 Genome accession: NC_012731 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 1838010 - 1839302 bp Length : 1293 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTCGATCCCAATCTGCTGCGTACCGAGCCAGACGCAGTCGCAGAAAAACTGGCACGCCGGGGCTTTAAGCTGGATGT AGATAAACTTCGCGCGCTTGAAGAGCGTCGTAAAGTTCTGCAGGTGCAAACGGAAAACCTGCAGGCGGAGCGTAACTCCC GATCGAAATCCATTGGCCAGGCGAAAGCGCGCGGGGAAGACATCGAGCCATTACGCCTGGAAGTTAACAAGCTTGGCGAA CAACTGGATGCTGCAAAATCCGAGCTGGAAACGCTGCTGGCGGAAATTCGCGATATCGCGCTGGCGATCCCGAATATTCC TCATGATGATGTGCCGGTTGGTCGCGACGAAAACGACAACGTTGAAGTTAGCCGCTGGGGTACGCCGCGTCAGTTCGATT TTGAGGTGCGCGATCATGTGACGCTGGGTGAAATGCACGGGGGGCTGGATTTTGCCGCCGCTGTTAAGCTCACCGGCTCG CGCTTCGTGGTGATGAAAGGGCAGCTGGCCCGTCTGCACCGCGCCCTGGCGCAGTTCATGCTGGATCTGCACACCGAACA GCATGGCTACAGCGAAAACTATGTCCCGTACCTGGTAAACCAGGACACCCTGTATGGCACTGGCCAGCTGCCGAAATTCG CCGGCGACCTGTTCCATACCCGTCCGCTGGAAGAAGAGGCTGACAGCAGCAACTACGCGCTGATCCCGACGGCGGAAGTG CCGCTGACCAACCTGGTGCGCGATGAAATCATCGACGAAGACGACCTACCGATCAAAATGACCGCCCATACGCCGTGCTT CCGCTCTGAAGCCGGTTCCTATGGCCGCGACACCCGCGGTCTGATCCGTATGCACCAGTTCGATAAAGTTGAAATGGTGC AGATCGTCCGCCCGGAAGACTCTATGGCCGCGCTGGAAGAGATGACCGGTCACGCCGAGAAAGTGCTGCAGCTGCTGGGC CTGCCGTACCGTAAGGTCGCGCTGTGCACCGGCGATATGGGCTTCAGCGCCTGCAAAACCTATGACCTCGAAGTGTGGGT TCCGGCGCAAAACACTTATCGTGAGATCTCCTCCTGCTCCAACGTCTGGGATTTCCAGGCGCGTCGTATGCAGGCTCGCT GCCGCAGCAAGTCCGATAAGAAGACCCGTCTCGTTCATACCCTGAATGGTTCTGGCCTGGCAGTAGGTCGTACCCTGGTG GCGCTGATGGAAAACTATCAGCAGGCTGATGGCCGTATCGAGATCCCGGAAGTGCTGCGCCCGTATATGCGCGGCCTCGA ATATATCGGCTAA Protein sequence : MLDPNLLRTEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVQTENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKLGE QLDAAKSELETLLAEIRDIALAIPNIPHDDVPVGRDENDNVEVSRWGTPRQFDFEVRDHVTLGEMHGGLDFAAAVKLTGS RFVVMKGQLARLHRALAQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADSSNYALIPTAEV PLTNLVRDEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLG LPYRKVALCTGDMGFSACKTYDLEVWVPAQNTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLV ALMENYQQADGRIEIPEVLRPYMRGLEYIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-107 | 57 |
