|
Name : xerC (KP1_0170) Accession : YP_002917145.1 Strain : Klebsiella pneumoniae NTUH-K2044 Genome accession: NC_012731 Putative virulence/resistance : Unknown Product : site-specific tyrosine recombinase XerC Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4973 EC number : - Position : 173976 - 174878 bp Length : 903 bp Strand : + Note : site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers d DNA sequence : ATGACCGATTCTCCTCTCTTCTCCGCCGTCGCCCGCTTTCTTCGCCATCTTGGCGTTGAACGCCAGCTCAGCCCGATCAC GTTACTGAATTACCAGCGACAGCTGGACGCGCTGATCGCCCTGGCGGATGAGGCGGGCCTGAAAAGCTGGTCGCAGTGCG ATGCCGCTCAGGTGCGAAGCTTTGCGGTGCGTAGTCGCCGCGCGGGGTTAGGCCCGGCAAGCCTGGCGCTTCGCCTGTCG GCGCTGCGCAGTTTCTTCGACTGGCTGGTCGGCCAGGGCGAGCTCAGCGCCAATCCGGCGAAGGGGATTGCCGCGCCGAA AATTCCCCGCCACCTGCCAAAAAATATTGACGTCGATGACGTCAATCGACTGCTGGATATCGATCTCAACGATCCGCTGG CGGTGCGCGATCGGGCGATGCTGGAGGTGATGTACGGCGCGGGATTGCGTTTGTCCGAACTGGTCAACCTGGATATCAAA CACCTCGATCTCGAAAGCGGTGAGGTCTGGGTGATGGGCAAAGGCAGCAAAGAGCGCCGTTTACCGATCGGTCGCAACGC GGTGGCATGGATTGAGCACTGGCTGGATTTGCGCGGCCTGTTCGGTACCGATGACGACGCGCTGTTTTTGTCGAAGCTGG GCAAACGTATTTCGGCACGCAACGTACAGAAGCGATTCGCCGAGTGGGGCATTAAGCAGGGGCTGAACAGCCATGTACAC CCGCACAAGCTGCGCCACTCCTTTGCCACCCATATGCTGGAGTCGAGCGGCGATCTGCGCGGCGTGCAGGAGCTGCTGGG GCATGCTAACCTCTCCACCACCCAAATCTATACCCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCCGCGCATC CGCGCGCTAAACGGGGGAAATAA Protein sequence : MTDSPLFSAVARFLRHLGVERQLSPITLLNYQRQLDALIALADEAGLKSWSQCDAAQVRSFAVRSRRAGLGPASLALRLS ALRSFFDWLVGQGELSANPAKGIAAPKIPRHLPKNIDVDDVNRLLDIDLNDPLAVRDRAMLEVMYGAGLRLSELVNLDIK HLDLESGEVWVMGKGSKERRLPIGRNAVAWIEHWLDLRGLFGTDDDALFLSKLGKRISARNVQKRFAEWGIKQGLNSHVH PHKLRHSFATHMLESSGDLRGVQELLGHANLSTTQIYTHLDFQHLASVYDAAHPRAKRGK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 3e-35 | 41 |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 3e-35 | 41 |
