Gene Information

Name : cadA (KP1_1410)
Accession : YP_002918246.1
Strain : Klebsiella pneumoniae NTUH-K2044
Genome accession: NC_012731
Putative virulence/resistance : Virulence
Product : lysine decarboxylase 1
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1982
EC number : -
Position : 1356320 - 1358473 bp
Length : 2154 bp
Strand : +
Note : internal ID: KP1410

DNA sequence :
TTGACTATGAACGTTATTGCAATCATGAATCACATGGGGGTTTACTTCAAAGAAGAACCCATCCGTGAACTGCATCGTGC
TCTCGAACGCCTGGACTTCCGTATTGTCTACCCGAACGACCGTGACGACTTATTAAAACTTATTGAAAACAACTCTCGTC
TGTGCGGCGTGATCTTCGACTGGGATAAATACAATCTCGAACTGTGCGAAGAAATCAGCAAAATGAACGAGTACATGCCG
CTGTATGCGTTCGCTAACACCTACTCCACTCTGGACGTTAGCCTGAACGATCTGCGCATGCAGGTTCGCTTCTTCGAATA
TGCGCTGGGCGCTGCGGAAGATATCGCGAACAAAATCAAACAGAACACTGACGAATACATCGACACCATTCTGCCGCCGC
TGACCAAAGCGCTGTTCAAATATGTCCGTGAAGGTAAATATACCTTCTGTACCCCGGGCCACATGGGCGGTACCGCGTTC
CAGAAAAGCCCGGTAGGCAGCATCTTCTATGATTTCTTTGGCTCCAACACCATGAAATCCGATATCTCCATTTCGGTTTC
TGAACTGGGTTCCCTGCTGGACCACAGCGGCCCGCACAAAGAAGCGGAAGAGTATATCGCTCGCGTGTTTAACGCAGAAC
GCAGCTACATGGTGACCAACGGTACTTCTACCGCTAACAAAATCGTCGGCATGTACTCCGCGCCGGCCGGCAGCACCGTG
CTGATTGACCGTAACTGCCACAAATCGCTGACTCACCTGATGATGATGAGCGACATTACGCCGATCTACTTCCGTCCGAC
CCGTAACGCCTACGGTATCCTCGGCGGTATTCCGCAGAGCGAATTCCAGCACGCGACTATCGCCAAGCGTGTGAAAGAGA
CGCCGAATGCGACCTGGCCGGTACACGCGGTGATCACCAACTCGACTTACGATGGTCTGCTGTATAACACCGACTTCATC
AAGAAAACCCTGGATGTGAAATCCATCCACTTTGACTCCGCATGGGTCCCTTACACCAACTTCTCGCCGATCTATGAAGG
CAAATGCGGGATGAGCGGCGGCCGCGTTGAAGGGAAAGTGATTTATGAAACCCAGTCCACGCACAAACTGCTGGCGGCGT
TCTCCCAGGCGTCGATGATCCACGTGAAAGGCGACGTAAACGAAGAGACCTTCAACGAAGCCTACATGATGCACACCACC
ACCTCTCCACACTACGGGATCGTGGCCTCCACCGAAACCGCGGCGGCGATGATGAAGGGGAACGCTGGTAAGCGTCTGAT
CGACGGCTCTATTGAACGTTCCATCAAGTTCCGTAAAGAGATCAAACGTCTGAAAGGCGAGTCTGACGGCTGGTTCTTCG
ACGTCTGGCAGCCGGAGCATATCGATGGTCCTGAATGCTGGCCGCTGCGTTCCGACAGCGCATGGCACGGTTTCAAAAAC
ATCGATAACGAACACATGTACCTCGACCCGATCAAAGTCACGCTGCTGACTCCGGGGATGAAGAAAGACGGCACCATGGA
TGACTTCGGTATTCCGGCAAGCATCGTGGCGAAATACCTCGACGAACACGGCATCGTGGTAGAGAAAACCGGTCCGTACA
ACCTGCTGTTCCTGTTCAGTATCGGTATCGATAAGACTAAAGCGCTGAGCCTGCTGCGTGCGCTGACCGACTTCAAACGC
GCGTTCGACCTGAACCTGCGGGTGAAAAACATGCTGCCGTCGCTGTACCGTGAAGATCCTGAATTCTATGAAAACATGCG
TATTCAGGACCTCGCGCAGAACATTCACAAACTGATTGAGCATCACAACCTGCCGGATCTGATGTTCCGCGCGTTTGAAG
TGCTGCCATCGATGGTGATGACCCCGTATGCCGCGTTCCAGAAAGAGCTGCACGGTCAGACGGAAGAAGTGTATCTCGAA
GAGATGGTCGGCCGCGTCAACGCCAACATGATCCTGCCGTATCCTCCGGGAGTGCCGCTGGTGATGCCGGGTGAGATGAT
CACCGAAGAGAGCCGTCCGGTGCTGGAGTTCCTGCAGATGCTGTGCGAAATCGGCGCCCACTATCCAGGCTTCGAAACCG
ATATCCACGGCGCCTATCGTCAGGCGGATGGTCGTTACACCGTTAAAGTGCTGAAAGAAGAGAATAACAAGTAA

Protein sequence :
MTMNVIAIMNHMGVYFKEEPIRELHRALERLDFRIVYPNDRDDLLKLIENNSRLCGVIFDWDKYNLELCEEISKMNEYMP
LYAFANTYSTLDVSLNDLRMQVRFFEYALGAAEDIANKIKQNTDEYIDTILPPLTKALFKYVREGKYTFCTPGHMGGTAF
QKSPVGSIFYDFFGSNTMKSDISISVSELGSLLDHSGPHKEAEEYIARVFNAERSYMVTNGTSTANKIVGMYSAPAGSTV
LIDRNCHKSLTHLMMMSDITPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFI
KKTLDVKSIHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNEAYMMHTT
TSPHYGIVASTETAAAMMKGNAGKRLIDGSIERSIKFRKEIKRLKGESDGWFFDVWQPEHIDGPECWPLRSDSAWHGFKN
IDNEHMYLDPIKVTLLTPGMKKDGTMDDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIGIDKTKALSLLRALTDFKR
AFDLNLRVKNMLPSLYREDPEFYENMRIQDLAQNIHKLIEHHNLPDLMFRAFEVLPSMVMTPYAAFQKELHGQTEEVYLE
EMVGRVNANMILPYPPGVPLVMPGEMITEESRPVLEFLQMLCEIGAHYPGFETDIHGAYRQADGRYTVKVLKEENNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadA NP_756988.1 lysine decarboxylase, inducible Not tested PAI II CFT073 Protein 0.0 95
unnamed CAD66195.1 putative cadaverin decarboxylase Virulence PAI III 536 Protein 0.0 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cadA YP_002918246.1 lysine decarboxylase 1 VFG1670 Protein 0.0 67