Gene Information

Name : bglu_2g02340 (bglu_2g02340)
Accession : YP_002907938.1
Strain :
Genome accession: NC_012721
Putative virulence/resistance : Virulence
Product : type III secretion system protein YscR
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4790
EC number : -
Position : 274812 - 275462 bp
Length : 651 bp
Strand : -
Note : -

DNA sequence : 
ATGGTTCAGTTCAGTGACATTACCGGGCTGCTGCTGGTCGTCATCGCGATCAGCCTGCTGCCCTTCGTGGCCATGGTGGT
CACCTCCTACGCGAAGGTCGTGGTGGTGCTCGGCCTGCTGCGCAACGCGCTCGGCGTGCAGCAGGTGCCGCCCAACATGG
TGCTCAACGGCATCGCGATCCTGGTCTCGCTGTACGTGATGGCGCCGATCGGCATGCAGGCATCGAAGTCGCTGGAAGGC
CAGCAGCTCGCCTCGCAGCCGTCGCAGGCGCTGATCCAGGCGTTCGGCGCGGCCCGGGAGCCGTTCCGCGCGTTCCTCGA
GAAGCACACGCAGGAGCGCGAGAAGCGCTTCTTCCTGCGCTCGGCCGCCGTGGTGTGGCCCAAGGAGCAGGCCCAGCAGC
TCTCCGAGCATGACCTGATCGTGCTGGCGCCGTCGTTTACGCTTTCCGAGCTGACCGACGCGTTCAAGATCGGCTTCCTG
CTCTACATCGCGTTCATCGTGGTCGATCTCATCATCGCCAACGTGCTGCTCGCGCTGGGCCTGAACCAGGTCACGCCGAC
CAACGTCGCGATCCCGTTCAAGCTGCTGCTGTTCGTGGTGATGGACGGCTGGTCGACGCTGATCCACGGCCTCGTGATGA
CCTACAAGTAA

Protein sequence : 
MVQFSDITGLLLVVIAISLLPFVAMVVTSYAKVVVVLGLLRNALGVQQVPPNMVLNGIAILVSLYVMAPIGMQASKSLEG
QQLASQPSQALIQAFGAAREPFRAFLEKHTQEREKRFFLRSAAVVWPKEQAQQLSEHDLIVLAPSFTLSELTDAFKIGFL
LYIAFIVVDLIIANVLLALGLNQVTPTNVAIPFKLLLFVVMDGWSTLIHGLVMTYK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 1e-65 68
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 4e-69 67
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 4e-69 67
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 3e-69 67
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 3e-65 67
hrcR YP_198720.1 type III secretion system protein Virulence Hrp PAI Protein 4e-69 67
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 2e-68 66
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 2e-68 66
lscR AAO18040.1 LscR Virulence TTSS locus Protein 1e-46 48
hrcR NP_791222.3 type III secretion protein HrcR Virulence Hrp PAI Protein 1e-34 43
hrcR AAG33884.1 HrcR Virulence Hrp PAI Protein 5e-35 43
hrcR ABQ88359.1 HrcR Virulence Hrp PAI Protein 2e-33 42
hrpW AAB05075.1 HrpW Virulence Hrp PAI Protein 2e-33 42
hrcR AAB06005.2 HrcR Virulence Hrp PAI Protein 6e-37 42
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 7e-35 41
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 7e-35 41
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 7e-35 41
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 3e-36 41
hrcR AAT96146.1 HrcR Virulence T-PAI Protein 4e-34 41
hrcR AAT96200.1 HrcR Virulence T-PAI Protein 4e-34 41
escR AAK26700.1 EscR Virulence LEE Protein 2e-39 41
escR YP_003236103.1 T3SS structure protein EscR Virulence LEE Protein 2e-39 41
escR AAL57527.1 EscR Virulence LEE Protein 2e-39 41
escR NP_290283.1 type III secretion system protein Virulence LEE Protein 2e-39 41
escR CAC81847.1 EscR protein Virulence LEE II Protein 2e-39 41
escR YP_003223490.1 T3SS structure protein EscR Virulence LEE Protein 2e-39 41
escR CAI43889.1 EscR protein Virulence LEE Protein 2e-39 41
escR YP_003232138.1 type III secretion system protein Virulence LEE Protein 2e-39 41
escR AAC38369.1 EscR Virulence LEE Protein 2e-38 41
escR AAC31528.1 L0049 Virulence LEE Protein 2e-39 41
escR ACU09473.1 type III secretion system protein EscR Virulence LEE Protein 2e-39 41
ECs4583 NP_312610.1 type III secretion system protein Virulence LEE Protein 7e-39 41
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 2e-39 41
unnamed AAL06354.1 EscR Virulence LEE Protein 4e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
bglu_2g02340 YP_002907938.1 type III secretion system protein YscR VFG0188 Protein 1e-51 49
bglu_2g02340 YP_002907938.1 type III secretion system protein YscR VFG0394 Protein 2e-50 47
bglu_2g02340 YP_002907938.1 type III secretion system protein YscR VFG0044 Protein 8e-46 47
bglu_2g02340 YP_002907938.1 type III secretion system protein YscR VFG0827 Protein 8e-40 41
bglu_2g02340 YP_002907938.1 type III secretion system protein YscR VFG0715 Protein 8e-39 41
bglu_2g02340 YP_002907938.1 type III secretion system protein YscR VFG1012 Protein 8e-36 41