Gene Information

Name : ckrop_0829 (ckrop_0829)
Accession : YP_002906126.1
Strain : Corynebacterium kroppenstedtii DSM 44385
Genome accession: NC_012704
Putative virulence/resistance : Resistance
Product : cystathionine gamma-synthase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 2.5.1.48
Position : 983409 - 984572 bp
Length : 1164 bp
Strand : +
Note : -

DNA sequence :
ATGAGTGACATAGAAAAGGGAGACGCTCGAGACCGAGGATTGGAGACGTCTGCCGTTCACGCAGGGTGGACGCCGGAGGC
TGCAACCGGAGCAGTTAATCCACCTATTTATGCAACGTCTACCTATGCCCAAGACGGAGTCGGTGGACTGCGCGGCGGTT
ATGAGTATTCCAGGACGGGAAACCCAACCCGCACTGCATTAGAAAAAGCAATCGCTGAGCTAGAGCGGGGCAAGTACGGA
CGTGCCTTTGGCTCCGGAATGGCGGCTAGTGACGCAGTTTTGCGGGCCATGCTCAAACCCGGCGATCACATCATCATCCC
CAATGACGCATATGGCGGAACATTCCGCCTCATTGACAAGATTTTTGCGAAGTGGGGGATCGATTACACACCAGTGGCAA
TTAACGATCTCGATGAGGTGCAATCCGCGCTTACTGATCGGACGCGGCTGGTATGGGCTGAGTCCCCAACCAATCCGCTC
CTAACCATTGCGGATATCCCTGCTCTGGCTAAAGTCGCGCACAGCGTGAACGCCCGGTTGGTGGTTGACAATACGTTTGC
TACTCCGGCTTTGCAGCAACCGTTATCGCTTGGTGCAGACATCGTCGTCCATTCGACTACGAAATACATCGGTGGGCACT
CTGATGTGGTTGGCGGAGCAGTAGTGACGTCGGATCAAGAGGTCGATGATGAGGTTGCTTTCCTGCAGAATTCAGCCGGT
GCAATTGCCGGGCCCTTCGATTCATTCCTTACCCTGCGTGGACTGAGGAGTCTGCCAGTCCGGATGGAGCGACACAGCGC
GAATGCCCAGGCCATAGCTAACCGATTGGCTGATCACCCCGCGGTTAAAGAGGTCATTTATCCAGGGTTGGAGAGCCATC
CCGGGCACGCGGTTGCCGCTGCTCAAATGTCTCACTTCGGCGGCATGGTCTCTCTTCGCCTCGCTGACCACGATGCGGCA
CAGCGTCTATGCAAGAACACATCGGTCTTTACACTTGCCGAATCGCTTGGCGGCGTTGAATCACTGATCGAGCATCCGGC
AGCCATGACCCATGCGTCGACAGCGGGATCAGTGCTGGAAGTTCCCGATGATTTAGTTCGACTTTCGGTTGGTCTAGAAT
CCGCCGAAGACCTTATCGCCGACCTATTACAGGCACTTGACTAG

Protein sequence :
MSDIEKGDARDRGLETSAVHAGWTPEAATGAVNPPIYATSTYAQDGVGGLRGGYEYSRTGNPTRTALEKAIAELERGKYG
RAFGSGMAASDAVLRAMLKPGDHIIIPNDAYGGTFRLIDKIFAKWGIDYTPVAINDLDEVQSALTDRTRLVWAESPTNPL
LTIADIPALAKVAHSVNARLVVDNTFATPALQQPLSLGADIVVHSTTKYIGGHSDVVGGAVVTSDQEVDDEVAFLQNSAG
AIAGPFDSFLTLRGLRSLPVRMERHSANAQAIANRLADHPAVKEVIYPGLESHPGHAVAAAQMSHFGGMVSLRLADHDAA
QRLCKNTSVFTLAESLGGVESLIEHPAAMTHASTAGSVLEVPDDLVRLSVGLESAEDLIADLLQALD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-79 49
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-80 49
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 4e-61 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ckrop_0829 YP_002906126.1 cystathionine gamma-synthase BAC0207 Protein 3e-64 42