Gene Information

Name : ckrop_0506 (ckrop_0506)
Accession : YP_002905823.1
Strain : Corynebacterium kroppenstedtii DSM 44385
Genome accession: NC_012704
Putative virulence/resistance : Resistance
Product : putative substrate-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 607196 - 607924 bp
Length : 729 bp
Strand : +
Note : -

DNA sequence :
ATGAAAGATCACAACGCGCAACAGAGCCAGCGACGCTCCTCGCAGTATTCGCTGGTTGTCCACGACATCACGAAATCGTT
TGCTTCAACCCCAGTGTTGACGGGTATCTCCTTGGAGATCGGCCAGGGTGAATCCGTTGCGGTTATGGGTCCGTCGGGCT
CGGGCAAGTCCACTCTTTTGCATTGCATGTCCGGCGTGCTTGTTCCGGACGACGGTGAAATCCGGTACGGCGATACCGTC
GTTTCACGGCTGAATGATGCGAAAAGGTCGGCGCTCCGGCTGCGCGAATTCGGGTTTGTGTTCCAAGACGGGCAACTCCT
TCCGGAGCTCACGGCTCAGGAAAACGTGGCTCTTCCGGCGATTTTGCAGGGCACGTCTCGTAGGCGAGCGTATGCCGACG
CCGCCGACATGTTGAAGCGCCTGGGGCTAGGCAAGCTGATCCGTCGTCGACCAGGGAAAATGTCTGGCGGCCAGGCACAA
CGCGTCGCCATCGCCCGAGCCATCGCGGCTAAACCGGCCATTATTTTTGCCGACGAGCCGACGGGCGCTCTCGACCAATC
GACCGGCCACGAAGTCATGCAGCAGCTGATCGCGATCACCGAGCAGGCGGGCTCCACGTTGGTGATGGTGACTCACGATC
AAAGTGTCGCGAATTGGTGTCAGCGTCGGATTGAAATTCGTGATGGCATCATTCATGACGATCGTATGTTGTCCGGGGCG
GTGAGCTAA

Protein sequence :
MKDHNAQQSQRRSSQYSLVVHDITKSFASTPVLTGISLEIGQGESVAVMGPSGSGKSTLLHCMSGVLVPDDGEIRYGDTV
VSRLNDAKRSALRLREFGFVFQDGQLLPELTAQENVALPAILQGTSRRRAYADAADMLKRLGLGKLIRRRPGKMSGGQAQ
RVAIARAIAAKPAIIFADEPTGALDQSTGHEVMQQLIAITEQAGSTLVMVTHDQSVANWCQRRIEIRDGIIHDDRMLSGA
VS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-21 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-22 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-22 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-22 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-16 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ckrop_0506 YP_002905823.1 putative substrate-binding protein NC_008702.1.4606598. Protein 1e-21 47
ckrop_0506 YP_002905823.1 putative substrate-binding protein NC_012469.1.7686878. Protein 9e-27 44
ckrop_0506 YP_002905823.1 putative substrate-binding protein CP001581.1.gene598.p Protein 9e-22 42