Gene Information

Name : ckrop_0468 (ckrop_0468)
Accession : YP_002905787.1
Strain : Corynebacterium kroppenstedtii DSM 44385
Genome accession: NC_012704
Putative virulence/resistance : Virulence
Product : iron ABC transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 568941 - 570050 bp
Length : 1110 bp
Strand : -
Note : -

DNA sequence :
ATGACTGTTACTCATTCACCGGCGGCTTCGCCGACACCGACGTCCGCCGATGGCTCACCCCAGCCACCTGGTAGCAGCAA
GGCCGGCCGACGCCTCTATGTGCGTCGGATTACCGGCCTGGTTGTTTTACTCGTGCTGCTTGCAGTGTGTTTATGCGCTG
CGATGGCACTGGGGTCACGGAGTATTCCGTTGCCCAAGGTATGGGATGTTCTCAGCCATTTCTCGTCATCATCCGATTCT
TCAAATAGCGATACCGATACGCGGGTGATCATTGACCTCCGCATTCCCCGCGCCCTGCTCGGTGTGATTGTTGGGATGGC
ACTTGGTTGTGCGGGGGCGTTGATTCAGGGTCATACACGCAATCCGCTTGCGGATCCCGGCATTTTGGGGGTTTCAGCCG
GAGCGGCCTTCGCGGTGGTCTCGAGTTTCGCATTCTTCGGAGTGACGGGGAATGTTGCGACGACGCTCTGGGCATTCGGT
GGAGCAATCTCTGCCACCGCCTTGGTGTTCGGCTTGGCCTCTGTGGGGAAAGCGACAGCGAGCCCCTTGAACTTGGTGCT
CGGCGGTGCCGCGCTAGCCGCTGTGTTGTCATCATTAACCAGCGGACTGGTTCTCACCAACAACGACAACCTGAACCGCA
TGCGTTTTTGGACTGTGGGCGCGATCGCCGGCCGCGATATGAACGTCGTCATGGTGTCAGCTCCGGTGATCATCGTGGCA
CTTATTGCAGCCTTCGCTACCGGGCCTACGCTTAACCTTCTTAACTTGGGTGACGACGCTGCGACGTCATTGGGAGTTCA
TGTCGGGCGGTCCAGGATCGTCGGCGTCATCCTTATCGCCTTGCTCGCGGGAGCGGCGACGGCTGCGGCAGGGCCCATCG
GCTTCGTCGGACTGGTTGTGCCCCACGTTGTCCGTTCCATCACAGGCCCGGATTATCGCTGGATATTGCCCTATTCGGCG
TTGACGGGCGCTGTGCTTGTACTGGTGGCCGATATTGTGGGCCGCCTCATCGCGCGCCCGGGCGAAGTGGAGGTTGGCAT
CGTCCTCGCATTCGTGGGCGCACCGTTCTTCATTTACCTCATCAGCCGTAACAAGGTGGTGGAAGTATGA

Protein sequence :
MTVTHSPAASPTPTSADGSPQPPGSSKAGRRLYVRRITGLVVLLVLLAVCLCAAMALGSRSIPLPKVWDVLSHFSSSSDS
SNSDTDTRVIIDLRIPRALLGVIVGMALGCAGALIQGHTRNPLADPGILGVSAGAAFAVVSSFAFFGVTGNVATTLWAFG
GAISATALVFGLASVGKATASPLNLVLGGAALAAVLSSLTSGLVLTNNDNLNRMRFWTVGAIAGRDMNVVMVSAPVIIVA
LIAAFATGPTLNLLNLGDDAATSLGVHVGRSRIVGVILIALLAGAATAAAGPIGFVGLVVPHVVRSITGPDYRWILPYSA
LTGAVLVLVADIVGRLIARPGEVEVGIVLAFVGAPFFIYLISRNKVVEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 4e-17 43
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 4e-17 43
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 4e-17 43
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 4e-17 43
fecD AAL08452.1 FecD Virulence SRL Protein 1e-21 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ckrop_0468 YP_002905787.1 iron ABC transporter permease BAC0163 Protein 8e-22 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ckrop_0468 YP_002905787.1 iron ABC transporter permease VFG1043 Protein 7e-22 42