Gene Information

Name : ckrop_0466 (ckrop_0466)
Accession : YP_002905785.1
Strain : Corynebacterium kroppenstedtii DSM 44385
Genome accession: NC_012704
Putative virulence/resistance : Virulence
Product : iron ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 566951 - 567856 bp
Length : 906 bp
Strand : -
Note : -

DNA sequence : 
ATGAGCCACACCATGAACTCGTCATCCAGTGCGTCAGGCTCCACACCCGCGCAGCCTGCAGGAAACTCGACACCGCGACA
CGAGGCTGTTCTACACGACGCTGCCCCGGCAGGTTCACTGACATTGTCTGGTCTGAGGGTCTCGTACGGGGATCGCAACG
TTATTCCGAACCTGGATGCGTCCATTCCGGGCGGAGCTGTCACCACCATTATCGGGCCCAATGGTTGTGGTAAATCCACT
CTGTTGAGGGCTGCAGCTCAGCTGATTTCGTCCTCGGGGTCAATCATGCTTGACGACGTCGATGTCCGGTCGCTGCGTCG
AAAAGAGTTAGCACAGCGGATTGGTGTGCTACCCCAGTCGCCCATCGCTCCCCCCGGCGTCGTGGTGAGCGACCTGGTCG
CCCGAGGACGACACCCCCACCAGTCGTGGTTCCGGCAATGGTCGTCGGACGATGAAGAGGAAGTAGCGCGGGCGCTTGAA
CTCACCCACGTTGCCGATTTAGCGGACCGACCAGTGTCGTCGCTGTCAGGTGGGCAGCGTCAGCGAGTGTGGATTTCGAT
GGTCTTGGCCCAGGACACCGAGGTGTTGTTCCTGGACGAGCCGACGACCTACCTTGACCTCTCCCACTCTATTGAAGTGC
TGAATCTGGTCACCGAGCTGAAGCATCGCTTGGGCCGGACCGTGGTGATGGTTCTGCACGATTTGAACTTGGCCGCGCGC
TATTCCGACAACGTGATCGTGATGGCCGATGGGCAGGTGACAGCGGCTGGTAAGCCATCCGAGGTTCTTACCGAGGAGCT
GTTGGAATCGTCATTTGGGCTGGACGCCAGAGTCATTGAGGATCCCGAATGCACTGAAGCACCTTTGGTGGTGCCCCGGA
AGCCCGAGGTGCTGAACTCTGCATAG

Protein sequence : 
MSHTMNSSSSASGSTPAQPAGNSTPRHEAVLHDAAPAGSLTLSGLRVSYGDRNVIPNLDASIPGGAVTTIIGPNGCGKST
LLRAAAQLISSSGSIMLDDVDVRSLRRKELAQRIGVLPQSPIAPPGVVVSDLVARGRHPHQSWFRQWSSDDEEEVARALE
LTHVADLADRPVSSLSGGQRQRVWISMVLAQDTEVLFLDEPTTYLDLSHSIEVLNLVTELKHRLGRTVVMVLHDLNLAAR
YSDNVIVMADGQVTAAGKPSEVLTEELLESSFGLDARVIEDPECTEAPLVVPRKPEVLNSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-68 58
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-47 45
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 4e-56 45
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 4e-56 45
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-53 44
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-53 44
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-53 44
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-53 44
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-44 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ckrop_0466 YP_002905785.1 iron ABC transporter ATP-binding protein BAC0164 Protein 7e-48 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ckrop_0466 YP_002905785.1 iron ABC transporter ATP-binding protein VFG0925 Protein 4e-54 49
ckrop_0466 YP_002905785.1 iron ABC transporter ATP-binding protein VFG1042 Protein 6e-48 45