Gene Information

Name : ckrop_0271 (ckrop_0271)
Accession : YP_002905600.1
Strain : Corynebacterium kroppenstedtii DSM 44385
Genome accession: NC_012704
Putative virulence/resistance : Unknown
Product : aminotransferase AlaT
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0436
EC number : -
Position : 336526 - 337833 bp
Length : 1308 bp
Strand : -
Note : broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor

DNA sequence :
GTGAGCTCTTCCGATAAAAACGCGACACCCGCACCAGAAAACACCGACACCAGCAGCGCGACCCCGACCCAGGTCACTGG
GCGACCGCGGCTCAAGCACCTGGATCAGTCCAGCAAACTGCGCAACGTCCTCTACGAAATCCGCGGGCCGGTCAATGCCG
AAGCAGAACGCATGATCGCCGATGGTCACAGGATTCTGCAGCTCAACACCGGTAACCCGGCGGTCTTCGGCTTCGAGGCA
CCCGATGTCATCATGCGTGACATGATCGCGGCCCTGCCCACCGCCCAGGGGTACAGCACCGCGAAAGGCATCATCCCGGC
GCGCCGCGCCATTGCCACGCGATACGAATTAGTTCCCGGATTCCCTAGCGCCGATATCGACGATATCTACTTGGGTAATG
GGGTCTCTGAGCTCATCACCATGACTACTCAGGCTCTCCTCGACGATGGTGATGAAGTGCTCATTCCCGCCCCCGATTAT
CCCCTCTGGACGGCGGCGACCTCGTTGGCCGGCGGAAAACCTGTGCATTATTTCTGTCGCGAGGACGATAATTGGAACCC
CGACATCGAGGACATCAAAGCCAAGGTCACTCCGAAAACCAAGGCAATTGTCGTTATTAACCCGAATAACCCCACTGGGG
CTGTCTATAGCCGGGAAACGCTGCAGAAAATTGTCGATATCGCCCGCGAGAATTCACTTCTCATTCTTGCCGACGAAATC
TACGACCGGATTCTTTACGACGATGCCGAACACATCAGCATCGCTTCTCTCGCACCTGATCTGCTGTGCATCACATTCAA
CGGATTGTCCAAGGCATATCGTGTGGCTGGATACCGGTCGGGCTGGATGGTCCTCACCGGCCCCAAGGAACATGCCCAGG
GGTTCATCGAGGGGCTGGACTTGCTCGCATCAACGCGCTTGTGCCCCAATGTGCCTGCTCAGCATGCTATTCAGGTGGCG
CTTGGCGGCAAGCAATCCATCTACGACCTCACACTCCCCGGTGGCCGTCTGCTAGAGCAACGGAATGTAGCGTACGAAAA
GCTCAATGAGATCCCGGGCGTTTCGGTTGTTAAACCGATGGGTGCTTTGTATGCCTTCCCCAAATTGGATCGGAATGTTT
ATGACATTCATGACGACGAACAATTCATGTTTGATCTCTTGCGCGCAGAAAAGATCCACCTCGTCCAAGGCACCGGATTC
AATTGGCCGGAGCCCGACCACTTCCGCGTTGTCACTCTCCCGTGGGCTCGTGATCTGGCAGATGCGATCGAACGCCTCGG
CAACTTCTTGTCCAGCTACCACCAGTAA

Protein sequence :
MSSSDKNATPAPENTDTSSATPTQVTGRPRLKHLDQSSKLRNVLYEIRGPVNAEAERMIADGHRILQLNTGNPAVFGFEA
PDVIMRDMIAALPTAQGYSTAKGIIPARRAIATRYELVPGFPSADIDDIYLGNGVSELITMTTQALLDDGDEVLIPAPDY
PLWTAATSLAGGKPVHYFCREDDNWNPDIEDIKAKVTPKTKAIVVINPNNPTGAVYSRETLQKIVDIARENSLLILADEI
YDRILYDDAEHISIASLAPDLLCITFNGLSKAYRVAGYRSGWMVLTGPKEHAQGFIEGLDLLASTRLCPNVPAQHAIQVA
LGGKQSIYDLTLPGGRLLEQRNVAYEKLNEIPGVSVVKPMGALYAFPKLDRNVYDIHDDEQFMFDLLRAEKIHLVQGTGF
NWPEPDHFRVVTLPWARDLADAIERLGNFLSSYHQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 2e-160 80
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 2e-160 80
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 2e-160 80
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 2e-160 80