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Name : sigC (ckrop_0184) Accession : YP_002905519.1 Strain : Corynebacterium kroppenstedtii DSM 44385 Genome accession: NC_012704 Putative virulence/resistance : Unknown Product : RNA polymerase sigma factor Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 236521 - 237207 bp Length : 687 bp Strand : - Note : Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate DNA sequence : ATGGAGGATAGATCCATAGCCTTCCTACAGACCCCTGGTAGAGGTGACTTTCTCCATCAACTTGGTAAGGTGAATACCGT GACAAGACATGACAAGGACGACGCACGCGTCACAGCATTAGCTCTCCGTGCCGGCCAGGGGGATCGGGCCGCGCTCACCG AGTTCATCCGACGCACCCAGAAGGACGTCTGGCGTCTCCTTGCTCATCTTGCCGACATTGACCGCGCCGACGATCTCACC CAAGAGACCTACCTGCGCATTATCTCTGCTTTGCCGACGTTTGCAGGCCGTTCGAGTGCGCGCACGTGGCTGCTTTCCGT TGCGCGACGAGTGTGGGTCGATAGCGTCCGGCATGACATGGCTCGGCCACAGTCTACCGGTACGGAATGGGAAACCGTGG CTGATCAGCACACGGCAACGAATACTGCCGCCAGCAGTTCCTGGTCAGACTGGGTCGACGTGCAGCTCCTTATGGAGAAT TTGGATCCCGACCGCCGAGAAGCGCTCATCCTTACGCAGGTCTTGGGATACACCTACGACGAAGCAGCGACGATCGTCGG TGTTCGCGTGGGGACGATTCGATCCCGGGTAGCTCGGGCGCGCACCGACCTCATCGAGGCAACGTCAAACCACGCAACGA AAAAACACCGTCACCTCAGCTCGGTGCAGGAACGGGCACACGGGTAA Protein sequence : MEDRSIAFLQTPGRGDFLHQLGKVNTVTRHDKDDARVTALALRAGQGDRAALTEFIRRTQKDVWRLLAHLADIDRADDLT QETYLRIISALPTFAGRSSARTWLLSVARRVWVDSVRHDMARPQSTGTEWETVADQHTATNTAASSSWSDWVDVQLLMEN LDPDRREALILTQVLGYTYDEAATIVGVRVGTIRSRVARARTDLIEATSNHATKKHRHLSSVQERAHG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sigC | YP_005126716.1 | ECF-family sigma factor C | Not tested | Not named | Protein | 3e-48 | 64 |
