Gene Information

Name : rph (ckrop_1400)
Accession : YP_002906683.1
Strain : Corynebacterium kroppenstedtii DSM 44385
Genome accession: NC_012704
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 1669950 - 1670714 bp
Length : 765 bp
Strand : -
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGAGTGATTTTGTACGCGCTGATGGCCGTGCCCTTGATGAAATGCGTCCTGTCCGTATTGTTCGTGGCTTTACGACGAA
TCCCGCTGGGTCTGTCTTAGTGGAATTCGGGAACACACGTGTGATGTGTACTGCCTCGGTGGAGGACCGTGTGCCTCGTT
TTAAAAAGGACAGCGGTGAAGGGTGGTTAACGGCCGAGTATTCGATGCTTCCCTCGGCGACGGCGGAGCGGATGCCGCGC
GAGTCAATGCGGGGGAAGGTTAAGGGGCGGACGCATGAGATTTCCCGTCTGGTGGGGCGTTCGCTTCGAGCTGCTATTGA
CCTGAAGGCGTTGGGTGAAAACACCATTGCGTTGGATTGCGATGTCCTCCAGGCAGATGGTGGTACGCGTACTGCCTCTA
TTACCGGTGCCTATGTTGCTCTTGCCGATGCGTTGACATACCTGGAAGCGGAGGGCCTGGTGTCTCAGAATGCCTTGCTT
CCTCCTGTTGCTGCAGTGTCCGTCGGTCTTATCGACGGGCATGTGTGCCTGGACCTGCCGTATGAAGAGGATTCTCGCGC
GGAGGTCGACATGAACGTCGTGATGACGGAATCGGGCGAGTTCGTGGAGATCCAGGGTACGGGTGAACACAGCACATTTT
CTCGTGAGCAGTTGATGCAGTTTATGGATGCGGCGGAAAAGGGATGTTCAGAGCTGATTCGTGCTCAGAAGGAAGCTCTG
TCGAAGCCGTATCCGAAACGTTTGCCGAACCGGAAGAACGCTTAA

Protein sequence :
MSDFVRADGRALDEMRPVRIVRGFTTNPAGSVLVEFGNTRVMCTASVEDRVPRFKKDSGEGWLTAEYSMLPSATAERMPR
ESMRGKVKGRTHEISRLVGRSLRAAIDLKALGENTIALDCDVLQADGGTRTASITGAYVALADALTYLEAEGLVSQNALL
PPVAAVSVGLIDGHVCLDLPYEEDSRAEVDMNVVMTESGEFVEIQGTGEHSTFSREQLMQFMDAAEKGCSELIRAQKEAL
SKPYPKRLPNRKNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 9e-83 76