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Name : GBP346_A0936 (GBP346_A0936) Accession : YP_002895660.1 Strain : Burkholderia pseudomallei MSHR346 Genome accession: NC_012695 Putative virulence/resistance : Unknown Product : integrase core domain protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 895273 - 896229 bp Length : 957 bp Strand : - Note : identified by match to protein family HMM PF00665 DNA sequence : GTGCGTAGACAGCCGGGGGCAAGCGGGGGCAAGTGGGGCCGAATCAATGCTAGACAACGCCGCGCGGAAGGAGCTGTTGG CCCGAAAGTAGCAAGCCCGCAGGCCAAGCGCGAAGCGGTCCGAATCTTGATGACCGAACGCACCATGGGTGTTACCCGGG CCTGCGGGCTGGTAGGGATTTCGCGCTCGCTGTTGCACTACGAATCACGCCGCCGAGTTGACGACGAAGCGCTGACTGGC CGGATGATGGCCATCGCCGCGCAGAAGCGTCGTTACGGCTATCGCCGGATTCACGTGTTGTTGCAGCGGGATGGCTGCTT CGCCAACCACAAGCGCATCTGGCGCCTGTACAGCAAGGCGGGACTGAGCGTGCGCAAGCGGCGACGCAAGCGTATTGCGG CTGTCGAGCGCACGCCGCTGCCGTTGCCAACAGGCCCGAATCAGAGCTGGTCGATGGACTTCGTTTCTGACGGGTTGGCC TATGGTCGGCGGTTTCGATGCCTGAACGTGGTCGACGACTACACGCGCGAGTGCTTGGCCATCGAGGTCGATACTTCGCT GCCGGGCCTACGAGTGCAGCAAGTGCTCGCGCGGCTCAAGGAGATGCGAGGCTTGCCCGCATCCATCACGGTCGACAACG GGCCGGAGTTCGCTGGTAAGGTGCTGGATGCATGGGCCTACGAAGCCGGCGTCACGCTGTCGTTCATTCGGCCTGGCAAA CCGGTGGAAAATGCCTATATCGAGAGCTTCAACGGGCGCTTCCGCGACGAATGCCTGAACGAGCACTGGTTCGTCTCAAT GCGCCACGCCAAGCAGCTGATTGAGGAATGGCGTATCGAGTACAACACCGAGCGGCCTCATAGTTCGCTCGGCTATCTGA CGCCTGCGCAGTTCGCTCGGGCGCACGATGCAAAGCAGCAGTTTTTAACCTCGGACTCAAACTGCAGTTCGGACTAA Protein sequence : MRRQPGASGGKWGRINARQRRAEGAVGPKVASPQAKREAVRILMTERTMGVTRACGLVGISRSLLHYESRRRVDDEALTG RMMAIAAQKRRYGYRRIHVLLQRDGCFANHKRIWRLYSKAGLSVRKRRRKRIAAVERTPLPLPTGPNQSWSMDFVSDGLA YGRRFRCLNVVDDYTRECLAIEVDTSLPGLRVQQVLARLKEMRGLPASITVDNGPEFAGKVLDAWAYEAGVTLSFIRPGK PVENAYIESFNGRFRDECLNEHWFVSMRHAKQLIEEWRIEYNTERPHSSLGYLTPAQFARAHDAKQQFLTSDSNCSSD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13540.1 | insertion sequence IS407 OrfB | Not tested | PAGI-8 | Protein | 5e-69 | 52 |
| XCV0439 | YP_362170.1 | ISRSO12 transposase (fragment) | Not tested | Hrp PAI | Protein | 1e-46 | 51 |
| trp1400B | CAB46580.1 | IS1400 transposase B | Not tested | HPI | Protein | 5e-49 | 43 |
