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Name : GBP346_A0048 (GBP346_A0048) Accession : YP_002894777.1 Strain : Burkholderia pseudomallei MSHR346 Genome accession: NC_012695 Putative virulence/resistance : Unknown Product : phage portal protein, pbsx family Function : - COG functional category : R : General function prediction only COG ID : COG5518 EC number : - Position : 39403 - 40494 bp Length : 1092 bp Strand : + Note : identified by match to protein family HMM PF04860; match to protein family HMM TIGR01540 DNA sequence : TTGTCGTCGTGGCGCCGCCGCGCGTCGACGACGGCGCCTTCCGCGTGCTCGAACGTCACCAGTTCCGCGGCAACGACTTT GAGGAACAGGCCGCGCCAAATCCGAGCGCCGGCGCGTGCCGAGGTCTTCACGTTCGACGATCCGACGCCCGTCATGAACC GGGCCGAGATTCTCGATTACGTCGAGTGTTGGTCGAACGGCGAATGGTTCGAGCCGCCGGTCAGCTTCGCCGGCCTGGCG AAATCGTTTCGCGCGAGCACGCACCATAGCTCGGCGCTGTTCTTCAAGGCGAACGTGCTGGCGTCGACGTTCCGCCCGCA CCGCTGGCTGTCGCGGCACGCGTTCGAGCGGTGGGCGCTCGATTTCCTGACGTTCGGCAACGGCTATCTGGAACGCCGCC GCAACATGGTCGGCGGCACCCTGCGGCTCGAGCCCGCGCTCGCGAAGTACGTACGGCGCAAGGCCGATTTCAGCGGCTTC GTGTACGTGAACGGCTGGCAGGAGCGGCACGAGTTCGAGCCCGACAGCGTGTTCCAGCTCGTGCGGCCGGACATCAATCA GGAGGTCTATGGCCTGCCCGAGTATCTGAGCTCGCTGCACTCGGCGTGGCTGAACGAATCGTCGACGCTGTTCCGGCGCA AGTATTACGAGAACGGCAGCCACGCCGGCTTCATCCTGTACATGACCGACGCCGCGCAGAAACAGGACGACGTGGACAAC ATGCGCGACGCGCTGAAGAACGCGAAGGGGCCGGGCAACTTCCGCAACGTGTTCATGTACGCGCCGGGCGGGAAGAAGGA CGGCATCCAGCTCATTCCCGTGTCCGAGGTCGCCGCGAAGGACGAGTTCTTCAACATCAAGAACGTGACGCGCGATGACC TGCTCGCCGCGCACCGCGTGCCGCCGCAGTTGCTTGGCATCGTGCCGAGCAATTCGGGCGGGTTCGGCACGCCGGATACC GCTGCACGCGTGTTCGGGCGCAACGAAATCAGGCCGCTACAGGCGCGCTTCGCCGAGCTGAACGACTGGCTCGGCGACGA GGTCGTGAGGTTCGACGATTACGAGATTCCGCCGGCGCCGGTCGCGGTGTAG Protein sequence : MSSWRRRASTTAPSACSNVTSSAATTLRNRPRQIRAPARAEVFTFDDPTPVMNRAEILDYVECWSNGEWFEPPVSFAGLA KSFRASTHHSSALFFKANVLASTFRPHRWLSRHAFERWALDFLTFGNGYLERRRNMVGGTLRLEPALAKYVRRKADFSGF VYVNGWQERHEFEPDSVFQLVRPDINQEVYGLPEYLSSLHSAWLNESSTLFRRKYYENGSHAGFILYMTDAAQKQDDVDN MRDALKNAKGPGNFRNVFMYAPGGKKDGIQLIPVSEVAAKDEFFNIKNVTRDDLLAAHRVPPQLLGIVPSNSGGFGTPDT AARVFGRNEIRPLQARFAELNDWLGDEVVRFDDYEIPPAPVAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4628 | NP_458710.1 | probable capsid portal protein | Not tested | SPI-7 | Protein | 6e-104 | 62 |
| t4321 | NP_807917.1 | capsid portal protein | Not tested | SPI-7 | Protein | 6e-104 | 62 |
| unnamed | ABR13463.1 | predicted capsid packaging protein | Not tested | PAGI-6 | Protein | 7e-92 | 60 |
