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Name : gspE (GBP346_A4198) Accession : YP_002898851.1 Strain : Burkholderia pseudomallei MSHR346 Genome accession: NC_012695 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 4022518 - 4024011 bp Length : 1494 bp Strand : + Note : an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene mo DNA sequence : GTGACGCAGGCGCTCGCGCAAGGCGCCCCGGATCAGCCGGCCGCCGGCGCGCCGTCGCCGATCGCCGCGCGGCTGTTGCC GTACGGCTTCGCGAAGGCCGGCCAGATCCTGATCGCACACCAGCACGCGGACACGCTCGAGGTGTGGATCAGCGAGCGCA CGAGCTCGGCCGCGCTCGCCGAAGTCGCGCGCAACTTCGGCGCGATCTCGTTGCAGCGCATACCGGCCGACGAGCTCGCG CAGGCGATCAACCATGCGTACGCGCGCCAGGACGGCAGCGCCGCGCAGATCGTCGGCGAGGTCGAGGGCGAAGTCGATCT GTCGCGGCTGATGCAGGACATCCCCGAGGTCGAGGATCTGCTCGAATCGGAAGACGACGCGCCGATCATCCGGATGATCA ACGCGCTCCTCACGCAAGCGGCGCGCGAGCAGGCGTCGGACATCCACATCGAGCCGTTCGAGAACGCGTCGGTCGTGCGC TTTCGCGTGGACGGCACGCTGCGCGACGTCGTGCGCCCGAAGAAGGCGCTGCACGGCGCGCTGATCTCGCGCATCAAGAT CATGGCGCAGCTCGACATCGCCGAAAAGCGCCTGCCGCAGGACGGCCGGATCACGCTGCGCGTGGGCGGGCGGCCCGTCG ACGTGCGGGTGTCGACGCTGCCGACCGGGCACGGCGAGCGCGCGGTGCTGCGTCTGCTGGAGAAGGATGCGCAGCGGCTG AATCTGGAAGCGCTCGGGATGGGCCGCGACACGCTCGTGCAGTTCGACAAGCTGATTTCCCGCCCGCACGGCATCGTGCT CGTGACGGGGCCGACCGGCTCGGGCAAGACGACGACGCTGTACGCGTCGATGTCGCGGCTCGAAACCGCGACGACCAACA TCATGACGGTCGAGGATCCGATCGAATACGATCTGTCCGGCATCGGCCAGACGCAGGTGAACGAGCGGATCGGGATGACG TTCGCGCGCGCGCTGCGCTCGATCCTGCGTCAGGACCCGGACATCATCATGATCGGCGAAATCCGCGATCTCGAAACCGC GCAGATCGCCGTGCAGGCGTCGCTCACGGGCCACCTGGTGCTCGCGACGCTGCACACGAACGACGCGGCGTCGGCCGTCA CGCGTCTCACCGACATGGGCGTCGAGCCGTACCTGCTTGCGTCTTCGCTGCTCGGCGTGCTCGCGCAGCGGCTCGTGCGC CAGCTCTGCCCGGCGTGCAAGGAGGAGCGGCACGAGGGCGGCCGCGCGGTCTGGCATCCGGTCGGCTGCGACAAGTGCGG GCATTCGGGCTACACGGGGCGTCGCGGCGTGTACGAGCTGCTCGTCATCGACGATTCGATCCGCTCGCTGATTCACCGCA ACGCGGCCGATGCGGAGATTCTCGCCACCGGCCGCGCGAACGGGATGCGCACGCTGCGCGACGACGCCGAGCGCTGGCTC GCGGCGGGCGCGACGTCGCTCGAGGAAGTGCTGCGCGTGACGGGAGGCGCATAG Protein sequence : MTQALAQGAPDQPAAGAPSPIAARLLPYGFAKAGQILIAHQHADTLEVWISERTSSAALAEVARNFGAISLQRIPADELA QAINHAYARQDGSAAQIVGEVEGEVDLSRLMQDIPEVEDLLESEDDAPIIRMINALLTQAAREQASDIHIEPFENASVVR FRVDGTLRDVVRPKKALHGALISRIKIMAQLDIAEKRLPQDGRITLRVGGRPVDVRVSTLPTGHGERAVLRLLEKDAQRL NLEALGMGRDTLVQFDKLISRPHGIVLVTGPTGSGKTTTLYASMSRLETATTNIMTVEDPIEYDLSGIGQTQVNERIGMT FARALRSILRQDPDIIMIGEIRDLETAQIAVQASLTGHLVLATLHTNDAASAVTRLTDMGVEPYLLASSLLGVLAQRLVR QLCPACKEERHEGGRAVWHPVGCDKCGHSGYTGRRGVYELLVIDDSIRSLIHRNAADAEILATGRANGMRTLRDDAERWL AAGATSLEEVLRVTGGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 7e-118 | 53 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 5e-118 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_002898851.1 | general secretory pathway protein E | VFG0182 | Protein | 6e-126 | 56 |
| gspE | YP_002898851.1 | general secretory pathway protein E | VFG2048 | Protein | 8e-118 | 52 |
| gspE | YP_002898851.1 | general secretory pathway protein E | VFG1876 | Protein | 9e-120 | 51 |
| gspE | YP_002898851.1 | general secretory pathway protein E | VFG0233 | Protein | 4e-87 | 49 |
| gspE | YP_002898851.1 | general secretory pathway protein E | VFG2426 | Protein | 7e-77 | 48 |
| gspE | YP_002898851.1 | general secretory pathway protein E | VFG0112 | Protein | 9e-81 | 44 |
