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Name : ctaD_1 (GBP346_A0418) Accession : YP_002895145.1 Strain : Burkholderia pseudomallei MSHR346 Genome accession: NC_012695 Putative virulence/resistance : Unknown Product : cytochrome c oxidase, subunit I Function : - COG functional category : C : Energy production and conversion COG ID : COG0843 EC number : 1.9.3.1 Position : 371375 - 372982 bp Length : 1608 bp Strand : + Note : identified by match to protein family HMM PF00115; match to protein family HMM TIGR02891 DNA sequence : ATGTCTAGCATCGGGCACGACGTAGCCGCGGGCCACGCGCACGACGACCACGCGCACGAAACCCCGCACGGCTGGCGGCG CTGGCTGTTCGCCACCAACCACAAGGATATCGGTACGCTGTACCTGCTGTTCTCGTTCATCATGTTCCTGTCGGGCGGCG TGATGGCGCTCGCGATTCGCGCCGAGCTGTTCGAGCCGGGCCTGCAGATCATGCGGCCCGAGTTCTTCAATCAGCTCACG ACGATGCACGGGCTGATCATGGTGTTCGGCGCGATCATGCCGGCCTTCGTCGGTTTCGCGAACTGGATGATTCCGCTGCA GATCGGCGCGTCGGACATGGCGTTCGCGCGGATGAACAACTTCAGCTTCTGGCTGCTGCCGGTGGCGGCGGTGCTGCTCG TCGGCTCGTTCTTCTCGCCGGGCGGCGCGACGGCCGCCGGCTGGACGCTGTATGCGCCGCTGTCGACGCAGATGGGCCCG GGCATGGACTTCGCGATCTTCGCGGTGCACATCATGGGCGCGTCGTCGATCATGGGCGGGATCAACATCGTCGTGACGAT CCTGAACATGCGCGCGCCGGGCATGACGCTGATGAAGATGCCGATGTTCGCGTGGACGTGGCTCATCACCGCGTACCTGC TGATCGCCGTGATGCCGGTTCTGGCGGGCGCGATCACGATGGTGCTGTTCGACCGTCACTTCGGCACGTCGTTCTTCAAC GCGGCGGGCGGCGGCGATCCGGTGATGTATCAGCACATCTTCTGGTTCTTCGGCCACCCCGAGGTGTACATCATGATTCT GCCGGCGTTCGGGATCGTGTCGCAGGTGATCCCGGCGTTCTCGCGCAAGCCGCTCTTCGGCTACAGCTCGATGGTGTACG CGACCGCGTCGATCGCGATCCTGTCGTTCATGGTCTGGGCGCACCACATGTTCGTGACCGGCATGCCGGTGACGGGCCAG CTGTTCTTCATGTACGCGACGATGCTGATCGCGGTGCCGACGGGCGTGAAGGTGTTCAACTGGCTCGCGACGATGTGGCG CGGCTCGCTCACGTTCGAGACGCCGATGCTGTTCGCGATCGGCTTCCTGTTCGTGTTCACGATGGGCGGCTTCACGGGCC TGATGCTCGCGATGGCGCCGCTCGACATCCAGTACCACGGTACGTACTTCGTCGTCGCGCACTTCCATTACGTGCTCGTC GCGGGGTCGCTGTTCGCGCTCTTCGCCGGCTGGTACTACTGGGCGCCGAAATGGACCGGCTGGATGTACAACGAGACGCG CGGGAAGATCCACTTCTGGGCGTCGATGATCTTCTTCAACGTCACGTTCTTCCCGATGCACTTCGTCGGCCTCGCGGGCA TGCCGCGCCGCTATGCGGACTACCCGGCGCAGTTCACCGATTTCAACCAGCTCGCGACGATCGGCGCATTCGGCTTCGGC CTCGCGCAGGTGTACTTCCTGTTCGCGATCGTGCTGCCCGCGTATCGCGGCGGCGGCGAGCTCGAGCGCGCATCCGACAA GCCGTGGGACGGCGCGACGGGCCTCGAGTGGACGGTGCCGAGCCCGGCTCCGTTCCACACGTTCGAGCATCCGCCGACGG TCGAGTAA Protein sequence : MSSIGHDVAAGHAHDDHAHETPHGWRRWLFATNHKDIGTLYLLFSFIMFLSGGVMALAIRAELFEPGLQIMRPEFFNQLT TMHGLIMVFGAIMPAFVGFANWMIPLQIGASDMAFARMNNFSFWLLPVAAVLLVGSFFSPGGATAAGWTLYAPLSTQMGP GMDFAIFAVHIMGASSIMGGINIVVTILNMRAPGMTLMKMPMFAWTWLITAYLLIAVMPVLAGAITMVLFDRHFGTSFFN AAGGGDPVMYQHIFWFFGHPEVYIMILPAFGIVSQVIPAFSRKPLFGYSSMVYATASIAILSFMVWAHHMFVTGMPVTGQ LFFMYATMLIAVPTGVKVFNWLATMWRGSLTFETPMLFAIGFLFVFTMGGFTGLMLAMAPLDIQYHGTYFVVAHFHYVLV AGSLFALFAGWYYWAPKWTGWMYNETRGKIHFWASMIFFNVTFFPMHFVGLAGMPRRYADYPAQFTDFNQLATIGAFGFG LAQVYFLFAIVLPAYRGGGELERASDKPWDGATGLEWTVPSPAPFHTFEHPPTVE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1478 | YP_001800872.1 | cytochrome c oxidase subunit I | Not tested | Not named | Protein | 9e-106 | 51 |
