|
Name : GBP346_A4119 (GBP346_A4119) Accession : YP_002898772.1 Strain : Burkholderia pseudomallei MSHR346 Genome accession: NC_012695 Putative virulence/resistance : Resistance Product : heavy metal cation transport ATPase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2217 EC number : - Position : 3945646 - 3948138 bp Length : 2493 bp Strand : - Note : identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01512; match to protein family HMM TIGR01525 DNA sequence : ATGACCGAGGCCACCCGGGCCGAAAACCGGCCGCGAACGCCAGAAGCCGATCGCGGCGGCGCGCAGTCGGGCGATGCGCG CACATCGGCGCGCGCCGCTGGCTGCTGCTCGCACCATCACCCGCATGGCGAGGTCGAAACGCAGGCGAATCTCGCGGTTC AGTCAAGCAATCGCGATTCGAGCGACCACGCACATGCACCCCATTCGCATGCGAACGGCGACCATCCGCACGACCACGAC CACGACCACGACCACGACCGCGACCGCGACCACGACGGCGCGGCGTGCTGCGCGCCCGCCCCCGTCGCGTTCGCGCCGTT GCCCGGCGCGCGAAAGGCCGCCGGCGGCCGTGTGCGCTCGGCGTTCCGGATCATGCAGATGGACTGCCCGACCGAGGAGA CACTGATCCGCAAGAAGCTGGGCGCGATGTCCGAAGTCGCGGCGCTCGAATTCAACCTGATGCAGCGGATGCTCGCGGTC GAGCACGTGCCGGGCGCGGAAGCCGGCATCGCCGCCGCGATCCGCTCGCTCGGCATGACGCCCGAACAGGCGGACGCCGG CGCGTCGGGCCGTGGCGCGTTGCCCGCGCCGGCCGACGCGCCGCGCCCGTGGTGGCCGCTCGCGGTCGCGGGCGTCGCGG CGGCGGCGTCGGAAGCGGCCACGTGGCTGCAACTGCCGGTATGGCTCGCCGCCGCGCTCGCGCTCGCCGCGGTCGCGACC TGCGGCCTCGGCACGTATCGCAAGGGCTGGATCGCGCTCACGAACGGCAACCTGAACATCAACGCGCTGATGAGCATCGC GGTGACGGGCGCGATGGCGATTGGCCAGTGGCCCGAGGCCGCGATGGTGATGGTGCTCTTCACCGTCGCCGAATTGATCG AGGCGCGCTCGCTCGACCGTGCGCGCAACGCGATCCAGAGCCTGATGCGCCTCGCGCCCGACACCGTGACGCTCAGGCAG CCCGACGGCACGTGGCAGCCGGTCGACGCCGCGCAGGTCGCGCTCGGTGCGATCGTGCGCGTGAAGCCGGGCGAGCGCAT CGGCCTCGACGGCGAGATCGTTGCCGGCCGCTCGACCGTCAACCAGGCGCCGATCACGGGCGAGAGCCTGCCCGTCGAGA AAACCGAGGGCGACGCGGTGTACGCGGGCACGATCAACGAAGCCGGCTCGTTCGAATATCGGGTGACGGCGGTCGCGAGC AACACGACGCTCGCGCGGATCATCCATGCGGTCGAGGAGGCGCAGGGCGCGAAGGCGCCGACGCAGCGCTTCGTCGACAG CTTCGCGCGCGTCTACACGCCGATCGTGTTCGCGATCGCGCTCGTCGTCGCGATCGCGCCGCCGCTCGTGCTCGACGGCG CATGGCGCGACTGGATCTATCGCGCGCTCGTGCTGCTCGTGATCGCGTGCCCATGCGCGCTCGTGATCTCGACGCCCGTG ACGATCGTATCGGGGCTCGCGGCGGCCGCGCGGCGCGGGATTCTCGTGAAGGGCGGCGTGTACCTCGAGCAGGGGCGCCG CCTCGCGTGGCTCGCGCTCGACAAGACGGGCACGATCACGCGCGGCAAGCCGGTGCAGACCGATTTCGAGATGCGCGCAG CCGACGTCGACGCCGCGCTCGTGCGGGGGCTCGCCGCGCGCCTCGCCGCACGCTCGGATCACCCGGTTTCGCAGGCGGTC GCGGCGGCGAGCGCGGCTCAAGCCGGCGCGGGCGGCGTCCCGCGCGCGAAGCCCGCGTCGTTCGCCGACGTCGCCGATTT CGAGGCGATTCCCGGCCGCGGCGTGCGCGGCAAGATCGACGGCGTGCCGTACTGGCTCGGCAATCATCGCCTCGTCGAGG AGCTCGACTGCTGCACGAGCGCGCTCGAAGCGCGTCTCGACGAGCTCGAGCGGCAGGGCAAGACGGTCGTGATGCTGATC GACGGCGCGCGCGTGCTCGGCCTCTTCGCGGTGGCCGACACGGTGAAGGACACGAGCCGCGCGGCGGTTGCCGAGCTGCA CGCGCTCGGCATCAAGACCGCGATGCTGACGGGCGACAACCCGCACACCGCGCAAGCGATCGCGCAGCAGGTCGGCATCG ACGACGCGCGCGGCAACCAACTGCCGCAGGACAAGCTCGCCGCCGTCGAAGCGCTCGCGGCGGGCGGCCGCGCGGTCGGC ATGGTCGGCGACGGGATCAACGACGCGCCGGCGCTCGCGCGCGCCGACATCGGCTTCGCGATGGGCGCGATGGGCACCGA TACCGCGATCGAGACGGCCGACGTCGCGCTGATGGACGACGACCTGCGCAAGATCCCGGCGTTCGTGCGGCTGTCGCGCG CGACGCATCGCGTGCTCGTGCAGAACATCGCGTTCGCGCTCGCCGTGAAGGCGGTGTTCGTCGGCCTCACGGTCGCGGGG ATGGGCACGATGTGGATGGCGGTGTTCGCCGACGCGGGCGCGAGCCTCATCGTCGTCGGCAACGGCTTGCGGCTGTTGCG CCGCGGCCAATGA Protein sequence : MTEATRAENRPRTPEADRGGAQSGDARTSARAAGCCSHHHPHGEVETQANLAVQSSNRDSSDHAHAPHSHANGDHPHDHD HDHDHDRDRDHDGAACCAPAPVAFAPLPGARKAAGGRVRSAFRIMQMDCPTEETLIRKKLGAMSEVAALEFNLMQRMLAV EHVPGAEAGIAAAIRSLGMTPEQADAGASGRGALPAPADAPRPWWPLAVAGVAAAASEAATWLQLPVWLAAALALAAVAT CGLGTYRKGWIALTNGNLNINALMSIAVTGAMAIGQWPEAAMVMVLFTVAELIEARSLDRARNAIQSLMRLAPDTVTLRQ PDGTWQPVDAAQVALGAIVRVKPGERIGLDGEIVAGRSTVNQAPITGESLPVEKTEGDAVYAGTINEAGSFEYRVTAVAS NTTLARIIHAVEEAQGAKAPTQRFVDSFARVYTPIVFAIALVVAIAPPLVLDGAWRDWIYRALVLLVIACPCALVISTPV TIVSGLAAAARRGILVKGGVYLEQGRRLAWLALDKTGTITRGKPVQTDFEMRAADVDAALVRGLAARLAARSDHPVSQAV AAASAAQAGAGGVPRAKPASFADVADFEAIPGRGVRGKIDGVPYWLGNHRLVEELDCCTSALEARLDELERQGKTVVMLI DGARVLGLFAVADTVKDTSRAAVAELHALGIKTAMLTGDNPHTAQAIAQQVGIDDARGNQLPQDKLAAVEALAAGGRAVG MVGDGINDAPALARADIGFAMGAMGTDTAIETADVALMDDDLRKIPAFVRLSRATHRVLVQNIAFALAVKAVFVGLTVAG MGTMWMAVFADAGASLIVVGNGLRLLRRGQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | BAC57487.1 | Probable cadmium-transporting ATPase (Cadmium efflux ATPase) | Not tested | Type-IIIinv SCCmec | Protein | 4e-112 | 46 |
| unnamed | BAB47609.1 | cadmium resistance protein B | Not tested | Type-III SCCmec | Protein | 4e-112 | 46 |
| SE0075 | NP_763630.1 | cadmium resistance protein B | Not tested | SCCpbp4 | Protein | 3e-111 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| GBP346_A4119 | YP_002898772.1 | heavy metal cation transport ATPase | BAC0298 | Protein | 0.0 | 66 |
