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Name : amt (GBP346_A0398) Accession : YP_002895125.1 Strain : Burkholderia pseudomallei MSHR346 Genome accession: NC_012695 Putative virulence/resistance : Unknown Product : ammonium transporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0004 EC number : - Position : 352300 - 353802 bp Length : 1503 bp Strand : + Note : identified by match to protein family HMM PF00909; match to protein family HMM TIGR00836 DNA sequence : ATGCGCAAAATCCTGATGTCCCTGTTGATGGCCGGCTCGCTGCTTGCGGGCGGCATCGGCGCCGCGATGGCCGACGACGC GTCGTCGGCTCCCGCCGCCGCATCGGCCGCAACGGCTTCCGACACGTCGGCCGGCGCCGCCGCGTCCGCACCGGCCGCGT CCGCCGCACCGGCCGCATCGGCGGCACCCGCCGCGTCGGCGCCCGCGGCAGCGTCCGCCGCCGCGCCGGCTTCGGCCGCC GCCGCGCCCGCCGCGCCGACCGCGCCGTTCTCGGTCGATTCGTCGAAGATCAACTCGGGCGACACCGCGTGGATGCTCAC GTCGACCGCGCTCGTGCTGTTCATGACGATCCCGGGCCTCGCGCTCTTCTACGGCGGCATGGTCCGCAAGAAGAACGTGC TCGCGACCGTGATGCAGAGCTTCGCGATCACCGCGCTGATCACGGTCCTCTGGACGGTGGTCGGCTACAGCCTCGCGTTC ACGCCGGGCAACGGCTTCATCGGCGGCTTCTCGCGCGTGTTCCTGTCCGGGATGAACTACATCCACGGCGACAAGGCGAC GACGCTCACCGTCAGCCATCTCGCGTCGACGATCCCGGAATCGGTCTACTTCGTCTACCAGATGACGTTCGCGATCATCA CGCCGGCGCTCATCTGCGGCGCGTTCGCCGACCGGATGAAATTCTCGGCGATGCTCGTCTTCATGACGCTGTGGTCGCTG ATCGTCTACGTGCCGATCGCGCACATGGTCTGGGAGCCGACGGGCTGGCTGTCGGCGGACGGCGTGCTCGACTTCGCGGG CGGCACGGTCGTGCACATCAACGCCGGCATCGCGGGCCTCGTGTCGTGCCTCATGCTCGGCAAGCGCGTCGGCTACGGCC GCGAAGCGATGGCGCCGCACAACCTGGTGCTGACGCTGATCGGCGGCTCGATGCTGTGGGTGGGCTGGTTCGGCTTCAAC GCGGGCTCCGCGGTGGCCGCGGACGGCCGCGCCGGCTTCGCGATGCTGACGACGCAAGTCGCCACCGCGTGCGCCGCGCT CGGCTGGATGTTCGCCGAATGGATCGCCAAGGGTAAGCCTTCGGTGCTCGGCATCGTGTCGGGCGCGGTCGCGGGTCTCG TCGCGATCACGCCGGCCGCCGGCTTCGTCGGCGTCGCGGGCGCGCTCGTGATCGGCATCGCGGCGGGCGTCGTCTGCTTC TGGTCGGCGACGTGGCTCAAGCACAAGCTCGGCTACGACGATTCGCTCGACGCGTTCGGCGTGCACGGCGTGGGCGGCAT TCTCGGCGCGCTGCTCACGGGCGTGTTCGCGGTCAAGGACATCGGCGGCGCGGACGGCAGCCTGCTGCTGCAGGCCAAGG GCGTCGCGATCACGCTCGTCTACAGCGGCATCGTCAGCTTCGTGCTGCTGAAGGTGATCGACATCGTGATCGGCTTGCGC GTGACCGAGGAAGAGGAGCGCGAAGGCCTCGACGTGATCCTGCACGGCGAGCACGTCGAATAA Protein sequence : MRKILMSLLMAGSLLAGGIGAAMADDASSAPAAASAATASDTSAGAAASAPAASAAPAASAAPAASAPAAASAAAPASAA AAPAAPTAPFSVDSSKINSGDTAWMLTSTALVLFMTIPGLALFYGGMVRKKNVLATVMQSFAITALITVLWTVVGYSLAF TPGNGFIGGFSRVFLSGMNYIHGDKATTLTVSHLASTIPESVYFVYQMTFAIITPALICGAFADRMKFSAMLVFMTLWSL IVYVPIAHMVWEPTGWLSADGVLDFAGGTVVHINAGIAGLVSCLMLGKRVGYGREAMAPHNLVLTLIGGSMLWVGWFGFN AGSAVAADGRAGFAMLTTQVATACAALGWMFAEWIAKGKPSVLGIVSGAVAGLVAITPAAGFVGVAGALVIGIAAGVVCF WSATWLKHKLGYDDSLDAFGVHGVGGILGALLTGVFAVKDIGGADGSLLLQAKGVAITLVYSGIVSFVLLKVIDIVIGLR VTEEEEREGLDVILHGEHVE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00287 | YP_008207752.1 | Ammonia permease | Not tested | AbaR25 | Protein | 2e-99 | 58 |
| BJAB0868_00291 | YP_008211617.1 | Ammonia permease | Not tested | AbaR26 | Protein | 2e-99 | 58 |
