|
Name : GBP346_A3826 (GBP346_A3826) Accession : YP_002898493.1 Strain : Burkholderia pseudomallei MSHR346 Genome accession: NC_012695 Putative virulence/resistance : Unknown Product : phage portal protein, pbsx family Function : - COG functional category : R : General function prediction only COG ID : COG5518 EC number : - Position : 3685960 - 3687015 bp Length : 1056 bp Strand : - Note : identified by match to protein family HMM PF04860; match to protein family HMM TIGR01540 DNA sequence : ATGAGCAAGCGCCGATCGCGCGCGCCGCGCACGTTCGCGGCCGCGCCCAATCCGAGCGCCGGCAGCGCCGCGCCGGCGCG TGCCGAGGTCTTCACGTTCGACGAACCGACGCCCGTCATGAACCGGGCCGAGATTCTCGATTACGTCGAGTGCTGGTCGA ACGGCGAATGGTTCGAGCCGCCGGTCAGCTTCGCCGGCCTGGCGAAATCGTTTCGCGCGAGCACGCACCATAGCTCGGCG CTGTTCTTCAAGGCGAACGTGCTGGCGTCGACATTCCGCCCGCACCGCTGGCTGTCGCGGCACGCGTTCGAGCGGTGGGC GCTCGATTTCCTGACGTTCGGCAACGGCTATCTGGAGCGCCGCCGCAACATGGTCGGCGGCACGCTGCGGCTCGAGCCCG CGCTCGCGAAGTACGTACGGCGCAAGGCGGATTTCAGCGGCTTCGTGTACGTGAACGGCTGGCAGGAGCGGCACGAGTTC GCGCCCGACAGCGTGTTCCAGCTCGTGCGGCCGGACATCAATCAGGAGGTCTATGGCCTGCCCGAGTATCTGAGCTCGCT GCACTCGGCGTGGCTGAACGAATCGTCGACGCTGTTCCGGCGCAAGTATTACGAGAACGGCAGCCACGCCGGCTTCATCC TGTACATGACCGACGCCGCGCAGAAGCAGGACGACGTGGACAACATGCGCGACGCGCTGAAGAACGCGAAGGGGCCGGGC AACTTCCGCAACGTGTTCATGTACGCGCCGGGCGGGAAGAAGGACGGCATCCAGCTCATTCCCGTGTCCGAGGTCGCCGC GAAGGACGAGTTCTTCAACATCAAGAACGTGACGCGCGACGATCTGCTCGCCGCACACCGCGTGCCGCCGCAGTTGCTCG GCATCGTGCCGAGCAATTCGGGCGGGTTCGGCACGCCGGATACCGCTGCGCGCGTGTTCGGGCGCAATGAAATCAGGCCG CTACAGGCGCGCTTCGCCGAGCTGAACGACTGGCTCGGCGAGGAGGTCGTGACGTTCGACGATTACGAGATTCCGCCGGC GCCGGTCGCAGCGTAG Protein sequence : MSKRRSRAPRTFAAAPNPSAGSAAPARAEVFTFDEPTPVMNRAEILDYVECWSNGEWFEPPVSFAGLAKSFRASTHHSSA LFFKANVLASTFRPHRWLSRHAFERWALDFLTFGNGYLERRRNMVGGTLRLEPALAKYVRRKADFSGFVYVNGWQERHEF APDSVFQLVRPDINQEVYGLPEYLSSLHSAWLNESSTLFRRKYYENGSHAGFILYMTDAAQKQDDVDNMRDALKNAKGPG NFRNVFMYAPGGKKDGIQLIPVSEVAAKDEFFNIKNVTRDDLLAAHRVPPQLLGIVPSNSGGFGTPDTAARVFGRNEIRP LQARFAELNDWLGEEVVTFDDYEIPPAPVAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4628 | NP_458710.1 | probable capsid portal protein | Not tested | SPI-7 | Protein | 1e-101 | 62 |
| t4321 | NP_807917.1 | capsid portal protein | Not tested | SPI-7 | Protein | 1e-101 | 62 |
| unnamed | ABR13463.1 | predicted capsid packaging protein | Not tested | PAGI-6 | Protein | 6e-90 | 60 |
