Gene Information

Name : GBP346_A3652 (GBP346_A3652)
Accession : YP_002898325.1
Strain : Burkholderia pseudomallei MSHR346
Genome accession: NC_012695
Putative virulence/resistance : Virulence
Product : Redoxin superfamily protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 3524325 - 3524828 bp
Length : 504 bp
Strand : +
Note : identified by match to protein family HMM PF00578; match to protein family HMM PF08534

DNA sequence : 
ATGAGCAAAGTCACGCTGGGTGGCAACCCGATCGACATCGCCGGCACGTTCCCGACGGTCGGCTCGCCGGCCCCCGACTT
CAAGCTGGTCGGCAAGGACCTCGCCGACGTGTCGCTCGCGACCTTCGCGGGCAAGCGCAAGGTGCTGAACATCGTCCCGA
GCCTCGACACGCCGACCTGCGCGGCGTCGACCCGCAAGTTCAACGAAGCGGCGAGCAAGCTCGACAACACGGTCGTCGTC
GTCGTGTCGGCGGATCTGCCGTTTGCCGCGACCCGCTTCTGCACGACGGAAGGCCTCGCGAACGTCATCACCGCGTCGAC
GTTCCGGGGCGGCCGCGCGTTCGCCGACGCGTACGGCGTGAACGTGACAAGCGGCCCGCTCGATGGCCTGGCCGCGCGCG
CGGTCATCGTGATCGACGAAAACGACAAGGTGACGTACACCGAGCTCGTCAGCGAGATCAAGAACGAGCCGAACTACGAT
GCCGCGCTCGCCGCGCTGAAATAA

Protein sequence : 
MSKVTLGGNPIDIAGTFPTVGSPAPDFKLVGKDLADVSLATFAGKRKVLNIVPSLDTPTCAASTRKFNEAASKLDNTVVV
VVSADLPFAATRFCTTEGLANVITASTFRGGRAFADAYGVNVTSGPLDGLAARAVIVIDENDKVTYTELVSEIKNEPNYD
AALAALK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 2e-33 51
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 9e-34 51
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 1e-33 51
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 6e-34 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GBP346_A3652 YP_002898325.1 Redoxin superfamily protein VFG0087 Protein 3e-34 51