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Name : GBP346_A3433 (GBP346_A3433) Accession : YP_002898107.1 Strain : Burkholderia pseudomallei MSHR346 Genome accession: NC_012695 Putative virulence/resistance : Virulence Product : capsule polysaccharide export protein, BexD/CtrA/VexA family Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1596 EC number : - Position : 3314762 - 3315925 bp Length : 1164 bp Strand : - Note : identified by match to protein family HMM PF02563 DNA sequence : ATGTCGCGTCCATTCTGCAAAACGTTTTTGATCGCGTGTGTCATGGGCGCGGTCACGCTCGCCGGTTGCTCAAGTATCCC TACGTCGGGGGCCAGTGGCGCGCAAATCGCGCGGGCTGCGCAGAGTCCATCCGGAATTCAGATCGTCGATGTGACCGAGG ATGTCGCGCGCCAGCTGTTTGCTGATCGAAACACGGCGGACTTCGTGACGGCGCTGGGCGGCGGTGCGTCGTTCCGGCAA CAGTTGGGCGTCGGCGATACGATTCAGGTGTCCATCTGGGAGGCGCCACCCGCCACGCTTTTTGGCGCGGCTCAGTCGGA AGGGAGTTCGGGGCCGGCGAACGCGCGCGTGACGGTGTTGCCCGATCAAGCCATCGATGGCGACGGCAATGTCAATATTC CGTTTGCGGGCCAGGTGAAGGCGGCCGGCCGCTCGCCCACGCAGTTGGCGCGTGAGATTGCCGCGCGGCTGAAGAGCATG GCGCACGATCCGCAAGTGCTCGTGAAGCTTTCGCGCAACGAGACGTCATATGTGACGGTCGTGGGCGATGTGGCCGAAAA CGCTCGCATGGCTCTGACCGCTCGGGGCGAGCGCCTGCTTGATGCATTGGCGAGCGCAGGCGGGGCGAAGCACCCGGTTG ACAAAGTTACGATCCAGATAACGCGCGGCAAGACGGTGGCCTCGTTGCCGCTCGACATGGTTATTCGTGATCCGCGGCAG AACGTCCCGTTGCATGCGGGCGATGTGGTCACTGTCCTGTTTCAGCCGTATAGCTTTACGGTGCTCGGCGCGACGGGCAA GAATGACGAAATCAATTTTGAAGCGAAGGGCATCACGCTTGCGCAGGCCCTGGCGCGTGCTGGCGGCTTGCAGGATTCGC GCGCCGATGCAAAGGGCGTATTCATCTTCCGACTTGAAGACGCCAACGCGCTGAAATGGCCGACGGCTCCCGTGCGTACG ACTGCGGATGGAAAGGTGCCTGTCGTGTATCGCGTGAATCTTCGCGATCCGAATTCGTTCTTCGTGGCTCAGAGCTTCAG GGTCGACAACAACGATCTGTTGTACGTTTCGAATGCGCCGATTGCCGAACTTCAAAAATTCTTGAATGTCGTGTTCTCCG TTGCGTATCCGGTGATTACCGGCGTTCAGACAGTCAGGTACTGA Protein sequence : MSRPFCKTFLIACVMGAVTLAGCSSIPTSGASGAQIARAAQSPSGIQIVDVTEDVARQLFADRNTADFVTALGGGASFRQ QLGVGDTIQVSIWEAPPATLFGAAQSEGSSGPANARVTVLPDQAIDGDGNVNIPFAGQVKAAGRSPTQLAREIAARLKSM AHDPQVLVKLSRNETSYVTVVGDVAENARMALTARGERLLDALASAGGAKHPVDKVTIQITRGKTVASLPLDMVIRDPRQ NVPLHAGDVVTVLFQPYSFTVLGATGKNDEINFEAKGITLAQALARAGGLQDSRADAKGVFIFRLEDANALKWPTAPVRT TADGKVPVVYRVNLRDPNSFFVAQSFRVDNNDLLYVSNAPIAELQKFLNVVFSVAYPVITGVQTVRY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ctrA | NP_273135.1 | capsule polysaccharide export outer membrane protein | Not tested | IHT-A | Protein | 9e-66 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| GBP346_A3433 | YP_002898107.1 | capsule polysaccharide export protein, BexD/CtrA/VexA family | VFG2566 | Protein | 1e-172 | 100 |
| GBP346_A3433 | YP_002898107.1 | capsule polysaccharide export protein, BexD/CtrA/VexA family | VFG0255 | Protein | 4e-66 | 42 |
