Gene Information

Name : GBP346_A3431 (GBP346_A3431)
Accession : YP_002898105.1
Strain : Burkholderia pseudomallei MSHR346
Genome accession: NC_012695
Putative virulence/resistance : Virulence
Product : capsular polysaccharide export inner-membrane protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1682
EC number : -
Position : 3312344 - 3313126 bp
Length : 783 bp
Strand : -
Note : identified by match to protein family HMM PF01061

DNA sequence : 
ATGACAAATTTCGGTCGATCGTTGGCGGTTCAGCGAAGAGTGATATTCGCATTGCTGATGCGGGAAGTCCTGACCCGGTA
CGGGCGTCACAACATCGGATTCCTGTGGCTATTTGTCGAGCCGATGATCTTCACGGTCGGGATTACCATTCTTTGGAATG
CGACAGGAGCGACTCACGGGTCGAATCTCCCTATTTCCGCGTTTGCCTTGACCGGCTATTCGACGGTGTTGCTTTGGCGA
AACATGCCCGGGCGGTGCAGTATGGCGGTCACGCCGAATTTGGCGCTGATGTATCACCGAAATGTCAAGGTCATAGATAT
TTTTATTGCTCGTATTCTGTTGGAGGTGGTCGGTAATACCGCATCCTTTTTCGTGTTGATGATTACATTTCATGCGCTGG
GCCTCGTTGACTATCCCGAGGATATTCTCGAGGTGATGTTTGCCTGGGTCATGATTATCTGGTTTGGTGCGTCGCTTGGT
TTCATCATTGGAGCGTTAAGCGAGAAGACGGAGCTCGTCGAGAAGCTTTGGCATCCGGTGACCTATCTGATGTTTCCGCT
ATCGGGCGCCATCTTCATGGTGGATTGGCTTTCGCCGGCATTTCAAAAAATCGTCCTGTGGCTGCCCATGGTGCACGGAG
TCGAAATGCTTCGCGAAGGGTACTTCGGCAGCCTCGTCGCGGCACATTATGATATCGGATATATGGCGTGCGCTTGCCTG
GCGATGTCTCTGGTCGGTCTCGCGCTGGTTCGCGACGTGGGTCGTGAGGTCACGCCAGAATGA

Protein sequence : 
MTNFGRSLAVQRRVIFALLMREVLTRYGRHNIGFLWLFVEPMIFTVGITILWNATGATHGSNLPISAFALTGYSTVLLWR
NMPGRCSMAVTPNLALMYHRNVKVIDIFIARILLEVVGNTASFFVLMITFHALGLVDYPEDILEVMFAWVMIIWFGASLG
FIIGALSEKTELVEKLWHPVTYLMFPLSGAIFMVDWLSPAFQKIVLWLPMVHGVEMLREGYFGSLVAAHYDIGYMACACL
AMSLVGLALVRDVGREVTPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrC NP_273137.1 capsule polysaccharide export inner-membrane protein Not tested IHT-A Protein 3e-46 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GBP346_A3431 YP_002898105.1 capsular polysaccharide export inner-membrane protein VFG2564 Protein 2e-120 100
GBP346_A3431 YP_002898105.1 capsular polysaccharide export inner-membrane protein VFG0257 Protein 1e-46 45
GBP346_A3431 YP_002898105.1 capsular polysaccharide export inner-membrane protein VFG0685 Protein 1e-48 42
GBP346_A3431 YP_002898105.1 capsular polysaccharide export inner-membrane protein VFG0697 Protein 1e-48 42