Gene Information

Name : GBP346_A3430 (GBP346_A3430)
Accession : YP_002898104.1
Strain : Burkholderia pseudomallei MSHR346
Genome accession: NC_012695
Putative virulence/resistance : Virulence
Product : Wzt2
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1134
EC number : -
Position : 3311691 - 3312347 bp
Length : 657 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGATTCGACTGACTCGGGTCAAGAAAACGTATCAGACGAAATCCGGAGAGCGTACGGTTCTTGATGGCGTCGACGTTGA
TATAGCAAGTGGAGAAAAGATCGGTATTCTCGGCGGGAATGGCGCGGGGAAATCAACGCTGATTCGTATCATAAGCGGCG
CCGAGAGGCCGACCGAGGGGCGTGTGTACCGGGGAATGAGCGTCTCGTGGCCCTTGGCATTTGGCGGGGCATTCCAGACT
TCGCTCACGGGTATCGACAATCTTCGTTTTATATGCCGAATTTATGATGTATCGGTTGAGGACAAGCTTCCGTTTGTGCG
TGAATTCACCGAGCTTGGCAGATACCTCAACGAACCGGTCAAAACATATTCGGCGGGGATGCGGGCCAAGCTTGCCTTTG
CCATTTCGATGGCAGTGGATTTCGATTGTTTCCTCATCGATGAAGTCACGGCTGTCGGGGATGAGCGTTTCCGTCAAAAA
TGTCATGTGGAATTGTTCGAGAAGCGTAATTCCAGGGCAATGATTTTTGTTTCTCACGATCCGGGATTTATTCGCGCTAA
CTGTCAGCGAGCGACGGTTTTGCATGGGGGGAAGTTGTATGAATTTCCGGAAATGGACGAGGCGTATCATTTTTATCGGG
AAATGCAGCGCGTATAA

Protein sequence : 
MIRLTRVKKTYQTKSGERTVLDGVDVDIASGEKIGILGGNGAGKSTLIRIISGAERPTEGRVYRGMSVSWPLAFGGAFQT
SLTGIDNLRFICRIYDVSVEDKLPFVREFTELGRYLNEPVKTYSAGMRAKLAFAISMAVDFDCFLIDEVTAVGDERFRQK
CHVELFEKRNSRAMIFVSHDPGFIRANCQRATVLHGGKLYEFPEMDEAYHFYREMQRV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 7e-63 59
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 8e-42 43
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 4e-43 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GBP346_A3430 YP_002898104.1 Wzt2 VFG2563 Protein 1e-101 100
GBP346_A3430 YP_002898104.1 Wzt2 VFG0696 Protein 8e-65 59
GBP346_A3430 YP_002898104.1 Wzt2 VFG0258 Protein 2e-63 59
GBP346_A3430 YP_002898104.1 Wzt2 VFG1449 Protein 3e-42 43