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Name : GBP346_A3390 (GBP346_A3390) Accession : YP_002898064.1 Strain : Burkholderia pseudomallei MSHR346 Genome accession: NC_012695 Putative virulence/resistance : Virulence Product : sugar isomerase, KpsF/GutQ family Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : - Position : 3267277 - 3268212 bp Length : 936 bp Strand : - Note : identified by match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393 DNA sequence : ATGAACCATCACAACTATCTTGATTCCGCGCGGCAAGTCTTCGATATCGAGTCGCGCGCGCTCGCGAGTCTCTCGGCACG CGTGGGCGACTCGTTCGGCGACGCGGTCGACGCGATCCTGCGCTCGAGTGGCCGCGTGGTCGTTTGCGGCATGGGCAAAT CCGGGATCATCGGGCGCAAGATCGCGGCGACGTTCGCGAGCACCGGAACGCCGAGCTTTTTCATGCATCCGGGCGAGGCG TACCACGGCGACCTCGGCATGGTGACGTCGGCCGACACGTTTCTCGCGATCTCGTATTCGGGCGAGACGGACGAAGTGAT CAAGCTGATTCCGTTTCTGAAAAGCAACCGGAATTATCTTGTCGCGCTGACGGGCAACGCGCGATCGACGCTCGCGCAAG CGGCGCACAGCCATCTCGACGCGGGCGTCGAGCAGGAAGCGTGTCCGCTTCAGCTCGCACCGACTTCGTCGACCACGGCC GCGCTCGCGATGGGCGACGCACTCGCCGTCACGCTGATGAAGGCGCGCGGCTTTCGCCCGGAGAACTTCGCGCGCTTCCA CCCGGGCGGCTCGCTCGGCCGCCGCCTGCTGTCGAAGGTCGACGACGAAATGACGGTCGACGGCCTGCCGTTCGTCGACG AGCGCGCGCCGGCGATCGACGTGCTGCAGGCGATGACGCGGGGCCGGCTCGGGCTCGCGATCGTGCGGCGCGAAACGGGC TTCGGAATCGTCACCGACGGCGATGTCCGTCGCGCGATCGAGGCGTATGGAGACACGCTGTTCCGGCGCGCCGCGTCGGA TCTGATGTCGGCGGATCCGGCGATGGTGCCGCTCGGCACGCGCGTGGAAGACGCGTTGCTGATGATGGAGGCGCGGCGCA TCAACGCGCTGCTCGTATTCGACGGCGAAGACGTCGTCGGCGTGTTCAAGAAATAG Protein sequence : MNHHNYLDSARQVFDIESRALASLSARVGDSFGDAVDAILRSSGRVVVCGMGKSGIIGRKIAATFASTGTPSFFMHPGEA YHGDLGMVTSADTFLAISYSGETDEVIKLIPFLKSNRNYLVALTGNARSTLAQAAHSHLDAGVEQEACPLQLAPTSSTTA ALAMGDALAVTLMKARGFRPENFARFHPGGSLGRRLLSKVDDEMTVDGLPFVDERAPAIDVLQAMTRGRLGLAIVRRETG FGIVTDGDVRRAIEAYGDTLFRRAASDLMSADPAMVPLGTRVEDALLMMEARRINALLVFDGEDVVGVFKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 1e-49 | 45 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 2e-49 | 45 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 1e-49 | 45 |
