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Name : GBP346_A3270 (GBP346_A3270) Accession : YP_002897945.1 Strain : Burkholderia pseudomallei MSHR346 Genome accession: NC_012695 Putative virulence/resistance : Virulence Product : putative epimerase/dehydratase WbiI Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 3156285 - 3158198 bp Length : 1914 bp Strand : - Note : identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02629; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein fa DNA sequence : ATGACGCGAGCATTTTGCCCGAAGGCTTCGTGGCTTTCCCTGGGCGCCTTTCTGTTCGATCTGATGGCGGTCGTATGCGC GTGGTTGATCGCGTATGTGGTCCGGTTCAATGGTGCGATGCCGCCTGAATTCCTGAAAGGCGCCTTCGTCGCGCTCGCAT GGGTGGTGCCGTTGTATGGCCTGCTGTTTCATGTTTTCGGGTTGTATCGCGGTCTCTGGGTATTTGCGAGCCTGCCGGAT CTGCTGCGTATCTCGAAGGCCGTGGTGGGCGGCGGCTTGATCGTGATGATCGGCGCGGTGATGCTGCAGCCGGTTCCGAT CATTCCGCGTTCGGTTCTCGTGCTGTCGCCGATGCTGCTGTTTCTTGCGATGGGTGGTGCACGTGCGCTCTATCGGGCGA CGAAGGAGTTCTATCTATACGGCGGACTGATCGGGCAGGGCAAGCCCGTGCTGATTCTCGGCGCCGGCAGTGCCGGCGCG AGCCTCGCCCGTGAACTGTCGCGCTCCGGTGAGTGGCGTCTTGCCGGTCTGCTCGATGACGATCCCGCGAAACACGGGCG CGAAGTCTACGGCTATAAGGTACTGGGTTCGATCGGCGAAGTCGCAGACTGGGCCGAGGCCGCGAAAGCCGAATACGCGA TCATCGCGATTCCATCCGCATCGGTCGAAGCGCAACGTCGCTTCGCCACCCTCTGCGTGCGCGCCGGCGTCAGGGCCATG GTGCTGCCGTCGCTGACCGCATTGATGCCGGGCCAGGGCATTCTGTCGCAGATCCGCCAGATCGATCTCGAAGACCTGCT CGGCCGCGAGGCCGTGACGATCGACACGCCGCACGTCGAGGCGCTGCTGCGCGGCCGCGTCGTGATGGTGACGGGCGCGG GCGGCTCGATCGGCTCGGAGCTGTGCCGCCAGATCCTGAAGTTCCAGCCCGCGCAACTGATCGCGTTCGATCTGTCCGAA TATGCGATGTACCGGCTCACGGAAGAGTTGCGCGAGCGCTTCCCCGATCTGCCCGTCGTGCCGATCATCGGCGATGCGAA GGATTCGCTGCTGCTCGATCAGGTGATGTCGCGCTATGCGCCGCACATCGTGTTCCATGCGGCCGCGTACAAGCACGTGC CGTTGATGGAGGAGCTCAACGCATGGCAGGCGCTGCGCAACAACGTGCTCGGCACGTATCGCGTCGCGCGCGCGGCGATT CGCCACGACGTCAGGCACTTCGTGCTGATCTCGACCGACAAGGCCGTGAACCCGACGAACGTGATGGGCGCGAGCAAGCG CCTGGCCGAGATGGCTTGCCAGGCGCTGCAGCAGACGAGCGCGCGCACGCAGTTCGAGACGGTGCGTTTCGGCAACGTGC TCGGCAGCGCCGGCAGCGTGATTCCGAAATTTCAGCAGCAGATCGCCAAGGGCGGCCCGGTGACCGTCACGCATCCGGAA ATCACGCGCTTCTTCATGACGATTCCCGAGGCGTCGCAACTCGTGCTGCAGGCGTCGAGCATGGGGCAGGGCGGCGAGAT CTTCATTCTCGACATGGGCGAGCCGGTGAAGATCGTCGATCTCGCGCGCGATCTGATTCGCCTGTACGGCTTCACCGAGG AGCAGATCCGCATCGAGTTCAGCGGGCTGCGCCCGGGCGAGAAGCTCTATGAGGAACTGCTCGCCGACGACGAGACCACC ACCCGCACGCCACACCCGAAGCTGCGCACCGCGAAGGCGCGCGAGGTGCCCGATCATCTGCTCGACGAACTGCTGCCGTG GCTGATGCAGCACCGCGTGCTGAGCGACGATGAAGTGCGGCGCGACTTGCGGCGCTGGGTGCCCGAGTATCAGCCGGCCG TCGGCCCGACGCTGCAGAGCGTGCCGACCGGCAACGGGCTCGTCGCCGGCATCGGGCGCGAGGCGGGGCGCTGA Protein sequence : MTRAFCPKASWLSLGAFLFDLMAVVCAWLIAYVVRFNGAMPPEFLKGAFVALAWVVPLYGLLFHVFGLYRGLWVFASLPD LLRISKAVVGGGLIVMIGAVMLQPVPIIPRSVLVLSPMLLFLAMGGARALYRATKEFYLYGGLIGQGKPVLILGAGSAGA SLARELSRSGEWRLAGLLDDDPAKHGREVYGYKVLGSIGEVADWAEAAKAEYAIIAIPSASVEAQRRFATLCVRAGVRAM VLPSLTALMPGQGILSQIRQIDLEDLLGREAVTIDTPHVEALLRGRVVMVTGAGGSIGSELCRQILKFQPAQLIAFDLSE YAMYRLTEELRERFPDLPVVPIIGDAKDSLLLDQVMSRYAPHIVFHAAAYKHVPLMEELNAWQALRNNVLGTYRVARAAI RHDVRHFVLISTDKAVNPTNVMGASKRLAEMACQALQQTSARTQFETVRFGNVLGSAGSVIPKFQQQIAKGGPVTVTHPE ITRFFMTIPEASQLVLQASSMGQGGEIFILDMGEPVKIVDLARDLIRLYGFTEEQIRIEFSGLRPGEKLYEELLADDETT TRTPHPKLRTAKAREVPDHLLDELLPWLMQHRVLSDDEVRRDLRRWVPEYQPAVGPTLQSVPTGNGLVAGIGREAGR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 6e-85 | 43 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 4e-86 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| GBP346_A3270 | YP_002897945.1 | putative epimerase/dehydratase WbiI | VFG1300 | Protein | 4e-87 | 43 |
| GBP346_A3270 | YP_002897945.1 | putative epimerase/dehydratase WbiI | VFG0029 | Protein | 1e-75 | 43 |
