Gene Information

Name : rph (GBP346_A3155)
Accession : YP_002897833.1
Strain : Burkholderia pseudomallei MSHR346
Genome accession: NC_012695
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 3056384 - 3057115 bp
Length : 732 bp
Strand : +
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGACGAATTCCTCCCTACGCCCGAGCGGGCGCCGCGCCGACCAGTTGCGCGACGTGCGCATCACGCGCCACTACACGAA
GCATGCGGAAGGCGCGGTGCTCGTCGAGTTCGGCGACACGAAAGTGATCTGCACGGCGAGCGTCGCCGAGCGCGTGCCCG
AATTCCTGCGCGAGCGCGGCCAAGGCTGGCTCACCGCCGAATACGGGATGCTGCCGCGTGCGACGCACACGCGCAGCGAC
CGCGAAGCGGCGCGCGGCAAGCAAACCGGCCGCACGCAGGAAATTCAGCGCCTGATCGGCCGCGCGCTGCGCGCGGTATT
CGATCTGAACGCACTCGGCCCACGCACGCTGCACCTCGATTGCGACGTGATCCAGGCCGACGGCGGCACGCGCACGGCGA
GCATCACGGGCGCGTTCGTCGCCGCGCACGACGCGGTGACGAAACTCGTCGCGGCCGGCAGGATCGCGCGCTCGCCGATC
ACCGATTACGTCGCGGCGATCTCGGTCGGCGTGTTCGGCGGCACGCCGGTGCTCGACCTCGACTACGGCGAAGACTCCGC
GTGCGACACCGACATGAACGTCGTGATGACGGGCGCGGGCGGCTTCGTCGAGGTGCAGGGCACCGCGGAAGGCGCGCCGT
TCTCGCGCACCGAGATGAACGCGCTTCTCGATCTCGCGCAGGCCGGCATCGGCGAGCTCGTGCGGCTGCAGCGCGCGGCG
CTGGAGGCATGA

Protein sequence :
MTNSSLRPSGRRADQLRDVRITRHYTKHAEGAVLVEFGDTKVICTASVAERVPEFLRERGQGWLTAEYGMLPRATHTRSD
REAARGKQTGRTQEIQRLIGRALRAVFDLNALGPRTLHLDCDVIQADGGTRTASITGAFVAAHDAVTKLVAAGRIARSPI
TDYVAAISVGVFGGTPVLDLDYGEDSACDTDMNVVMTGAGGFVEVQGTAEGAPFSRTEMNALLDLAQAGIGELVRLQRAA
LEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 4e-64 59