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Name : phrB (GBP346_A2856) Accession : YP_002897545.1 Strain : Burkholderia pseudomallei MSHR346 Genome accession: NC_012695 Putative virulence/resistance : Unknown Product : deoxyribodipyrimidine photolyase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0415 EC number : 4.1.99.3 Position : 2788733 - 2790193 bp Length : 1461 bp Strand : - Note : identified by match to protein family HMM PF00875; match to protein family HMM PF03441 DNA sequence : TTGTCTTCATCCATCTCGATTGCGCCCGCCGTCGTCTGGTTTCGCGACGATCTGCGCGTGTCCGATCATCCCGCGCTCAT GCGCGCCGCCGAGTCGGGGCGCCCCGTGATCGGCGTCTACGTGTTCGACGAGCGCGTCGGCGGGCGGCCGCTGGGCGGCG CGGCGCGCTGGTGGCTGCACGGCTCGTTGCGCGCGCTCGGCGCGGCGCTCGCCGCGCTGGGCGGCACGCTCGCGCTGCTG CGCGGTGACGAGCACGATACGATCGTTTCGTTCGCCGCGGCGCTCGGCGCGGGCGCCGTCTACTGGAGCCGCCGCTATGC GCTTGCCGCGCGCGCGGTCGACAACGCGGTGCAGACGGCGCTCGACGCGCAGGGCATCGCGGTCGAGACGTTCAACGCGA GCCTGCTGTTCGAGCCGGGCGACCTCGTCAACGCGGACGGCCGCCCGTATCAGGTGTTCAGCGCGTACTGGCGCGCGGCG ATGCGCCGCGGCGTGCCGGCACCGCCGCTCGGCGCGCCGCGGCGCCTGAACGGCGGCGCGCTGCCGGCGGCGCTCGCGCG GCAGTGCGTGGCGCTCGACGCGCTCGGGCTCGAGCCGACGGGCCCGGACTGGGCGGGCGGCCTGCGCGACGCATGGCGTT TCGGCGAGGACGCCGCGCACCGTCGGCTGCGCGCCTTCGTCGACAGCCGGCTCGGCGGCTATGCGGCCGAGCGCGACCGG CCGGGCATCGCGTCGACGAGCCGGCTGTCGCCGTACGTGCGCTTCGGCAACCTGTCGGCGCGGCAGCTCTGGCATGCGGC CGCCGACGCGTACGCGCACGGCGCGGCGACCCAGGCGGACCTCGACAAGTTTCTGAGCGAGCTCGGCTGGCGGGAGTTCG GCTGGACCCAGTTGCACCACTTTCCGGACCTGCCGCGCCGCAACCTGCGCCACACGCTCGACGGCATGCCGTGGCGCGAC GATCCCGCCGCGCTTGCCGCATGGCGGCGCGGCGCCACGGGCTATCCGTTCGTCGACGCCGGCATGCGCGAGCTCTGGGC GACGGGCTGGATGCACAACCGCGTGCGGATGGTATGCGCTTCGTTTCTCGTCAAGCACTTGCTGATCGACTGGCGGGCGG GCGAGGCGTGGTTCTGGGACACGCTCGTCGACGCGGACGCGGCGTCGAACGCCGCGAACTGGCAGTGGGTCGCGGGCTGC GGCGCGGATGCCGCGCCGTATTTCCGGATCTTCAATCCGGTCGCGCAGGGCCGGAAGTTCGATCCGGACGGCGCCTATGT GCGGCGCTGGGTGCCCGAGCTGGCCGGCCTGCCGCCCGCGACGATCCACGAGCCGTGGGCGGCGCCCGGCGCGCAGCTCG CCGCGGCGGGCGTGCGGCTCGGCGAGACTTATCCGCTGCCGATCGTCGCGCACGACGCCGCGCGCCGGCGAGCGCTCGAC GCATTCGGGGCAATCAGATGA Protein sequence : MSSSISIAPAVVWFRDDLRVSDHPALMRAAESGRPVIGVYVFDERVGGRPLGGAARWWLHGSLRALGAALAALGGTLALL RGDEHDTIVSFAAALGAGAVYWSRRYALAARAVDNAVQTALDAQGIAVETFNASLLFEPGDLVNADGRPYQVFSAYWRAA MRRGVPAPPLGAPRRLNGGALPAALARQCVALDALGLEPTGPDWAGGLRDAWRFGEDAAHRRLRAFVDSRLGGYAAERDR PGIASTSRLSPYVRFGNLSARQLWHAAADAYAHGAATQADLDKFLSELGWREFGWTQLHHFPDLPRRNLRHTLDGMPWRD DPAALAAWRRGATGYPFVDAGMRELWATGWMHNRVRMVCASFLVKHLLIDWRAGEAWFWDTLVDADAASNAANWQWVAGC GADAAPYFRIFNPVAQGRKFDPDGAYVRRWVPELAGLPPATIHEPWAAPGAQLAAAGVRLGETYPLPIVAHDAARRRALD AFGAIR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CD241_0111 | YP_005124380.1 | putative riboflavin biosynthesis protein | Not tested | Not named | Protein | 2e-73 | 48 |
| DIP0113 | NP_938509.1 | riboflavin biosynthesis protein | Not tested | Not named | Protein | 1e-72 | 47 |
