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Name : GBP346_A2613 (GBP346_A2613) Accession : YP_002897305.1 Strain : Burkholderia pseudomallei MSHR346 Genome accession: NC_012695 Putative virulence/resistance : Unknown Product : oligopeptide/dipeptide transporter, C- region family Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 2545718 - 2547367 bp Length : 1650 bp Strand : - Note : identified by match to protein family HMM PF00005; match to protein family HMM PF08352 DNA sequence : ATGAGCGCCGCGCAGATCGCGCGCGGCGCCGGCGCGCCGCCGTCGCCGTCGACGCCGCCGCATGAGCCGTTGCTGTCGAT CGAGCGGCTGCGCGTGCGCTTCGGCGGCACGCTCGCCGTCGACGACGTATCGCTTGCGATCGGCCGCGGCGAGCGCGTCG CGCTCGTCGGCGAATCGGGCTCCGGCAAGAGCGTCACCGCGCTGGCGATCCTGCGCCTGCTGCGCGACGCCGACGTGAGC GGCGCGATCCGCTTCGCGGGCGAGACGCTCGCCGACAAGAGCGAGCGCGAGATGCGCGCGCTGCGCGGCGCGGACATCGC GATGATCTTCCAGGAGCCGATGACCGCGCTCAATCCGCTCTTCACGATCGGCGAGCAGATCGGCGAGACGATCGAGCTGC ACGATGGCGTATCGAAGCGCGACGCGCGCGCGCGGGCGATCGCGCTGCTCGCGCGCACCGGGATCGACCGGCCGGACGAG CGCGTCGACAGCTACCCGCACCAGTTGTCGGGCGGCCAGCGGCAGCGCGCGATGATCGCGATGGCGCTCGCATGCCGGCC GCGCCTGTTGCTCGCCGACGAGCCGACCACCGCGCTCGACGTGACGATCCGCGCGCAGATCGTCGAGCTGCTGCTCGAAC TGCAGCGTGACGCGGCGGCCGAGCGCGGGATGGCGGTGCTGCTCATCACGCACGATCTGAATCTCGTGCGGCGCTTCGCC GAGCGGGTCGCGGTGATGGAGAAGGGCCGGCTCGTCGAGTGCGGGCCGGTCGAGCGGATCTTCGATGCGCCCGAGCACCC GTACACGCAGCGCCTGTTGCACAGCCGGCCGCAGCGCACGGTGTCGCCCGTGTTGCCGATCGCGCCCGTCGTGCTCGACG CGCGCGGGGTCACCGTGCAGTTCAGGCAGAAGCTGCCGGGCTTCGCGGGCTGGCTCCGCTCGGGGCGCTTCACCGCGGTG TCGGACGCGAGCGTGTCGGTGCGGCAGGGCGAGACGCTCGGCATCGTCGGCGAATCGGGCTCCGGCAAGTCGACGCTCGC GATGGCGCTCCTCGGGCTGCAGCGGGTCGCGCACGGCGACATCGAATTCGAGGGCCGTTCGCTCGCGAGCTTTCGCGGGC GCGAGCGCGTCGCGCTGCGCGCGAACATGCAGGTGGTATTTCAGGATCCCTTCAGCTCGCTTTCGCCGCGGCAGACGATC GGGCGGATCGTGTCCGAAGGGCTCGAACTGCATCGCCCTCGGCTCACGGCCGACGCGCGCCGCGACAAGGTGATCGCGGT GCTGCGCGAAGTCGGCCTCGATCGGACGGTGCTGCATCGCTATCCGCACGAGTTCTCGGGCGGCCAGCGCCAGCGGATCG CGATCGCGCGCGCGCTCGTGCTGGAGCCGCGCGTGCTCGTGCTCGACGAGCCGACGAGCGCGCTCGACGTGTCGATCCAA CAACAAGTGTTGAAGCTGCTGTCGAATCTGCAACGAAAGTACAACCTGGGCTACGTGTTCATCAGCCACGATCTGGAGGT GATCGGCGCGATGGCGCACCGGGTGGCGGTGATGCAGGGCGGGGCGATCGTCGAGACGGGCGACGTCGAGCGCATCTTCA CCGAACCGGTGCATCCTTACACGCAAAAATTGCTGAAAGCCGTTCGTTAA Protein sequence : MSAAQIARGAGAPPSPSTPPHEPLLSIERLRVRFGGTLAVDDVSLAIGRGERVALVGESGSGKSVTALAILRLLRDADVS GAIRFAGETLADKSEREMRALRGADIAMIFQEPMTALNPLFTIGEQIGETIELHDGVSKRDARARAIALLARTGIDRPDE RVDSYPHQLSGGQRQRAMIAMALACRPRLLLADEPTTALDVTIRAQIVELLLELQRDAAAERGMAVLLITHDLNLVRRFA ERVAVMEKGRLVECGPVERIFDAPEHPYTQRLLHSRPQRTVSPVLPIAPVVLDARGVTVQFRQKLPGFAGWLRSGRFTAV SDASVSVRQGETLGIVGESGSGKSTLAMALLGLQRVAHGDIEFEGRSLASFRGRERVALRANMQVVFQDPFSSLSPRQTI GRIVSEGLELHRPRLTADARRDKVIAVLREVGLDRTVLHRYPHEFSGGQRQRIAIARALVLEPRVLVLDEPTSALDVSIQ QQVLKLLSNLQRKYNLGYVFISHDLEVIGAMAHRVAVMQGGAIVETGDVERIFTEPVHPYTQKLLKAVR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-80 | 44 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-80 | 44 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 3e-80 | 44 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-80 | 44 |
