Gene Information

Name : GBP346_A2341 (GBP346_A2341)
Accession : YP_002897042.1
Strain : Burkholderia pseudomallei MSHR346
Genome accession: NC_012695
Putative virulence/resistance : Unknown
Product : aminotransferase AlaT
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0436
EC number : -
Position : 2305496 - 2306734 bp
Length : 1239 bp
Strand : -
Note : broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor

DNA sequence :
GTGAAACCGATTCAGAAGTCGAACAAGCTGCTCAATGTCTGCTACGACATCCGCGGCCCCGTCCTCGAGCACGCGAAGCG
CCTCGAGGACGAGGGGCATCGCATCATCAAGCTGAACATCGGCAACCTGGCGCCGTTCGGCTTCGACGCGCCGGACGAGA
TCATCCAGGACATGATCCGCAACCTGCCGGCGTCCTCCGGCTATTCGGATTCGAAAGGCGTGTTCGCCGCGCGCAAGGCG
ATCATGCACTACACGCAGCAAAAGGGCGTGCACGGCGTCGGGCTCGACGACATCTACATCGGCAACGGCGCATCCGAGCT
CATCGTGATGGCGACGCAGGCGTTGCTGAACGACGGCGACGAGGTGCTGCTGCCCGCGCCCGACTATCCGCTCTGGACGG
CGGCCGTGAGCCTGTCGGGCGGCACGCCCGTGCACTACGTCTGCGACGAGTCGAACCGCTGGATGCCCGACCCCGACGAC
ATCCGCCGCAAGATCACGCCGAACACGAAGGCGCTCGTCGTGATCAACCCGAACAACCCGACGGGCGCGCTTTATTCCGA
CGCATTGCTCGTCGAGTTGATCGCGATCGCGCGCGAGCACGGGCTCATCATCTTCGCCGACGAGGTCTACGACAAGATCG
TCTACGACGGCAAGTCGCACACCGCGCTCGCGTCGCTCGCCGAGGACGTGATCACCGTCACGTTCAACAGCCTGTCGAAG
AGCTACCGGTCGTGCGGCTATCGCGCGGGCTGGATGTCGGTCGCGGGGCTCACGGCCGAGAACCGCCGCCGCGCGCACGA
TTACCTGGAGGGGCTCGGCATCCTGTCGTCGATGCGCCTTTGCGCGAACGTGCCCGGCCAGTACGCGATCCAGACCGCGC
TCGGCGGCTATCAGAGCATCAACGAGCTGATCATGCCGAGCGGGCGCCTGTACAAGCAGCGCGAGCTCGCGTACGACATG
CTGACGTCGATTCCCGGCGTGTCGTGCGTGAAGCCGGAAGCGGCGCTCTACATGTTTCCGCGCCTCGATCCGAAGCTCTA
CCCGATCGAGAACGACCAGCAGTTCATCCTCGAGCTGCTGCTGCGGGAGCGCGTGCTGCTCGTGCAGGGCACGGGCTTCA
ACTGGCCGACGTCGGACCACTTCCGCGTCGTGTTCCTGCCGAACGTCGACGACCTGACCGATTCGATCGAGCGGATCGCA
CGCTTTCTCGACGGCTACCGGAAGCGCAACTCGGTCTGA

Protein sequence :
MKPIQKSNKLLNVCYDIRGPVLEHAKRLEDEGHRIIKLNIGNLAPFGFDAPDEIIQDMIRNLPASSGYSDSKGVFAARKA
IMHYTQQKGVHGVGLDDIYIGNGASELIVMATQALLNDGDEVLLPAPDYPLWTAAVSLSGGTPVHYVCDESNRWMPDPDD
IRRKITPNTKALVVINPNNPTGALYSDALLVELIAIAREHGLIIFADEVYDKIVYDGKSHTALASLAEDVITVTFNSLSK
SYRSCGYRAGWMSVAGLTAENRRRAHDYLEGLGILSSMRLCANVPGQYAIQTALGGYQSINELIMPSGRLYKQRELAYDM
LTSIPGVSCVKPEAALYMFPRLDPKLYPIENDQQFILELLLRERVLLVQGTGFNWPTSDHFRVVFLPNVDDLTDSIERIA
RFLDGYRKRNSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 5e-108 56
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 5e-108 56
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 5e-108 56
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 5e-108 56