|
Name : clpB (GBP346_A2331) Accession : YP_002897032.1 Strain : Burkholderia pseudomallei MSHR346 Genome accession: NC_012695 Putative virulence/resistance : Unknown Product : ATP-dependent chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2295465 - 2298062 bp Length : 2598 bp Strand : - Note : identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR03346 DNA sequence : ATGAGAATCGACAAGCTCACCACCAAATTCCAAGAGGCGCTCTCGGATGCGCAGAGTCTCGCCGCCGGGCGCGACAACCA GTACATCGAACCCGTCCACGTGCTGGCCGCGCTCGTCGCGCAGCAGGACGGCTCCGCGCGCTCGCTGCTGTCGCGTGCGG GCGTGCACATCCAGGCGTTGCAAGGCGCGCTCAACGAAGCGATCTCGCGCCTGCCGCAGGTGACGGGCACGGGCGGCGAC ATCCAGGTCGGCCGTGAACTCGCGGGCCTGCTGAACCAGGCCGACAAGGAAGCGCAGAAACTGAACGACACGTTCGTCGC GAGCGAGATGTTCCTGCTCGCGGTGGCCGACGACAAGGGCGAAGCCGGCAAGCTCGCGCGCCAGCACGGCCTCACGCGCC GCGCGCTCGAATCCGCGATCGCCGCGGTGCGCGGCGGCTCGCAGGTGCACAGCCAGGATGCCGAGAGCCAGCGCGAGGCG CTGAAGAAATACACGGTCGATCTGACCGAGCGCGCGCGCGCGGGCAAGCTCGATCCGGTGATCGGCCGCGACGACGAGAT TCGCCGCTCGATCCAGATCCTGCAGCGCCGCACGAAGAACAATCCGGTGCTGATCGGTGAGCCGGGCGTCGGCAAGACCG CGATCGTCGAAGGGCTCGCGCAGCGGATCGTCAACGGCGAGGTGCCCGAGACGCTGAAGAACAAGCGCGTGCTGTCGCTC GACATGGCGGCGCTGCTCGCCGGCGCGAAGTATCGCGGCGAGTTCGAGGAGCGCCTGAAGGCGGTGCTCAACGACATCGC GAAGGACGAGGGCCGCACGATCGTCTTCATCGACGAGATCCATACGATGGTCGGTGCGGGCAAGGCCGAAGGCGCGATGG ACGCGGGCAACATGCTCAAGCCCGCGCTGTCGCGCGGCGAGCTGCACTGCATCGGCGCGACGACGCTCGACGAATACCGC AAGTACATCGAGAAGGATGCCGCGCTCGAGCGCCGCTTCCAGAAGGTGCTCGTCGACGAGCCGAGCGTCGAGGCGACGAT CGCGATCCTGCGCGGGCTGCAGGAGAAGTACGAACTGCATCACGGCGTCGAGATCACCGATCCGGCGATCGTCGCCGCGG CGGAACTCTCGCACCGCTACATCACCGACCGCTTCCTGCCCGACAAGGCAATCGATCTGATTGACGAGGCCGCGTCGAGG ATCAAGATGGAAATCGACTCGAAGCCCGAAGAAATGGACAAGCTCGATCGCCGTCTGATCCAGTTGAAGATCGAGCGCGA AGCGGTGAAGAAGGAGCCGGACGAAGCGTCGCAGAAGCGTCTTGCGCTGATCGAGGAGGAAATCGAGCGGCTCGGGCGCG AATACGCGGATCTCGACGAGATCTGGACGGCCGAGAAGGCAGCCGTGCAGGGCAGTGCGCAACTGAAGGAAGAGATCGAC AAGGTGCGTGCCGACATTGCGCGCCTGCAGCGCGAAGGCAAGCTCGAGAAGGTCGCCGAGCTGCAGTACGGCAAGCTGCC GCAACTCGAGGCGCGGCTCAAGCAGGTCACGCAGGCCGAGGAGAGCGAGCAGCACAATCCGACGCGGCCGCGCCTGCTGC GCACGCAGGTCGGCGCGGAGGAAATCGCCGAGGTCGTCTCGCGCGCGACGGGCATTCCGGTGTCGCGGATGATGCAGGGC GAGCGCGAGAAGCTGCTGCACATCGAAGAGAAGCTGCATGAGCGCGTGGTCGGCCAGAACGAGGCGATCGACGCGGTCGC CGACGCGATCCGCCGCTCGCGCGCGGGCCTCGCCGATCCGAACCGTCCGTACGGCTCGTTCCTGTTCCTCGGCCCGACGG GCGTGGGCAAGACCGAGCTGTGCAAGGCGCTCGCCGGCTTCCTGTTCGATTCGGAAGAGCATCTGATCCGCATCGACATG AGCGAGTTCATGGAGAAGCACAGCGTCGCGCGGCTGATCGGCGCGCCGCCCGGCTACGTCGGCTATGAGGAAGGCGGCTA TCTGACCGAAGCCGTGCGTCGCAAGCCGTACAGCGTGATCCTGCTCGATGAGATCGAGAAGGCGCACCCGGACGTGTTCA ACGTGCTGCTGCAGGTGCTCGACGACGGCCGGATGACGGACGGGCAGGGGCGCACCGTCGACTTCAAGAACACCGTGATC GTGATGACGTCGAATCTCGGCTCGCAGCTGATCCAGTCGATGTCGGGCTCGCCGCAGGAAGAGATCAAGGATGCGGTGTG GGTCGAGGTCAAGCAGCACTTCCGCCCCGAGTTCCTGAACCGGATCGACGACGTCGTCGTGTTCCACTCGCTCGACCGCG GCAACATCCAGGCGATCGCGAAGATTCAGCTCGCGCGTCTGCACGACCGGCTCGCGAAGCTCGACATGGCGCTCGACGTG TCGGAGGCCGCGCTCGAGCAGATCGGCAAGGTCGGCTACGATCCGCTGTTCGGTGCGCGGCCGCTCAAGCGCGCGATCCA GCAGGAGATCGAGAATCCGGTCGCGAAGCTGATCCTCGCGGGCCGCTTCGGGCCGAAGGACGTGATTCCGGTCGACATGC AGGACGGCAGGTTCGTGTTCGAGCGCGTCGTGCATTGA Protein sequence : MRIDKLTTKFQEALSDAQSLAAGRDNQYIEPVHVLAALVAQQDGSARSLLSRAGVHIQALQGALNEAISRLPQVTGTGGD IQVGRELAGLLNQADKEAQKLNDTFVASEMFLLAVADDKGEAGKLARQHGLTRRALESAIAAVRGGSQVHSQDAESQREA LKKYTVDLTERARAGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSL DMAALLAGAKYRGEFEERLKAVLNDIAKDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYR KYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASR IKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEPDEASQKRLALIEEEIERLGREYADLDEIWTAEKAAVQGSAQLKEEID KVRADIARLQREGKLEKVAELQYGKLPQLEARLKQVTQAEESEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQG EREKLLHIEEKLHERVVGQNEAIDAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTELCKALAGFLFDSEEHLIRIDM SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVI VMTSNLGSQLIQSMSGSPQEEIKDAVWVEVKQHFRPEFLNRIDDVVVFHSLDRGNIQAIAKIQLARLHDRLAKLDMALDV SEAALEQIGKVGYDPLFGARPLKRAIQQEIENPVAKLILAGRFGPKDVIPVDMQDGRFVFERVVH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-104 | 41 |
