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Name : GBP346_A2123 (GBP346_A2123) Accession : YP_002896826.1 Strain : Burkholderia pseudomallei MSHR346 Genome accession: NC_012695 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase [NADP+] (ssdh) Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 2099683 - 2101143 bp Length : 1461 bp Strand : - Note : identified by match to protein family HMM PF00171; match to protein family HMM TIGR01780 DNA sequence : ATGTATCTCGAACACGCATTGAAGGACCCCTCGCTGTTGAGACATCAAGCGTATATCGGCGGTGAATGGCAGGCCGCGGA TTCTGACGCCACGTTCGAAGTCTTCGACCCGGCAACGGGAGAATCCCTTGGTACCGTGCCGAAAATGGGGGCGGCGGAAA CGGCGCGTGCCATCGAGGCAGCTCAAGCCGCGTGGGCCGGCTGGCGCATGAAGACGGCGAAAGAGCGCGCGGCCATCCTG CGTCGCTGGTTCGACCTGGTGATCGCGAACAGCGACGATCTCGCGCTGATTCTCACCACTGAGCAGGGCAAGCCGCTCGC GGAAGCCAAGGGCGAGATCGCTTACGCAGCCTCGTTCATCGAATGGTTTGCCGAAGAAGGCAAGCGCGTCGCCGGGGATA CGCTTCCCACACCTGACGCGAACAAGCGGATCGTCGTCGTCAAGGAGCCGATCGGTGTCTGCGCTGCCATCACACCGTGG AATTTCCCCGCCGCCATGATTGCGCGGAAGGTAGGGCCGGCCCTCGCTGCCGGTTGTCCGATCGTCGTCAAGCCCGCCGA GTCGACTCCGTTCTCCGCGCTTGCCATGGCGTTTTTGGCTGAACGTGCAGGCGTTCCGAAAGGCGTGCTAAGTGTCGTCA TCGGCGACCCGAAAGCGATCGGCACCGAGATAACGAGCAATCCCATCGTCCGAAAGCTGTCGTTCACGGGATCCACGGCG GTCGGCCGATTGTTGATGGCTCAGAGCGCCCCGACGGTGAAGAAACTCACGCTCGAGTTGGGCGGAAATGCTCCATTCAT TGTCTTCGACGATGCCGATCTCGATGCAGCCGTCGAAGGCGCCATCGCATCGAAATACCGCAACAACGGGCAAACGTGCG TCTGTACCAACCGCTTTTTCGTACACGAGCGTGTCTACGATGCGTTCGCGGACAAGCTCGCGGCGGCCGTGAGCAAGCTC AAGGTCGGACGCGGAACCGAGAGCGGAGCGACGCTCGGGCCGCTGATCAACGAGGCGGCGGTGAAGAAGGTGGAATCGCA CATTGCCGATGCGCTTGCTAAAGGCGCCTCGCTCATGACGGGCGGCAAGCGGCACGCATTGGGGCACGGTTTTTTCGAAC CGACGGTATTGACCGGCGTGAAGCCGGATATGGATGTGGCGAAAGAGGAGACGTTCGGCCCGCTCGCACCGTTGTTCCGG TTTGCGTCGGAGGAAGAATTGGTGCGCCTTGCCAACGATACGGAGTTCGGCCTTTCCGCTTATTTATACAGCCGCGATAT CGGTCGAGTTTGGCGCGTTGCCGAGGCCCTCGAATACGGCATGGTCGGGATCAATACGGGGCTCATTTCAAACGAAGTCG CGCCGTTCGGCGGTGTCAAGCAATCTGGGCTAGGCCGAGAAGGATCGCATTACGGTATCGACGACTATGTCGTGATCAAG TATTTGTGCGTCGCTGTTTGA Protein sequence : MYLEHALKDPSLLRHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAIL RRWFDLVIANSDDLALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPW NFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTA VGRLLMAQSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKL KVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFR FASEEELVRLANDTEFGLSAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIK YLCVAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-148 | 67 |
