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Name : GBP346_A2075 (GBP346_A2075) Accession : YP_002896778.1 Strain : Burkholderia pseudomallei MSHR346 Genome accession: NC_012695 Putative virulence/resistance : Virulence Product : recombinase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1961 EC number : - Position : 2042863 - 2043507 bp Length : 645 bp Strand : - Note : identified by match to protein family HMM PF00239; match to protein family HMM PF02796 DNA sequence : TTGCAATGCTCAGTCAAGCCTGAGGTCACGATGCGTATCGGCTATGCGCGCGTATCGACCGAGGAACAATGCCTTGCGCT GCAAGAGGATGCTTTGACTCGAGCAGGATGTGACTTGATTTTCAGCGACCACGGCATTTCGGGCACCAATTTCTGCCGAC CTGGCCTCGATCAAGCCCTCCAACACCTTGGACGAGGCGATACTTTGGTCGTTTGGCGTCTCGATCGACTCGGACGTTCG CTGACCAAACTCGTCGACATGATCGATTTATTGGGCCAACGCGATATCCATTTTGAATCGCTAACAGAATCGATCAATAC ACAATCACCGAGTGGCACGCTGATTTTTCATATCATTGCTGCGCTCGCACAGTTCGAGCGTGCGTTGATCAGCGAGCGGA CGCGTGCGGGTCTCGCGGCAGCAAAGAACCGTGGTGTACGTGTGGGGCGGCCAAGGTCGCTCACCGAATATCAAGCAAGT CAGGCAATTCGCCTATTGTCGGAACGCTCGATCGCCGCAGTTGCGAAGGAATTTGGTGTGCATCCGCAGACACTTAGGCG ATTGTGGGCAATCCATAAGCGGCACACAGAATCCGCAGGTGAATTTAACGAATCGAGTACATCACCGTGCGTCAAAGACG AATGA Protein sequence : MQCSVKPEVTMRIGYARVSTEEQCLALQEDALTRAGCDLIFSDHGISGTNFCRPGLDQALQHLGRGDTLVVWRLDRLGRS LTKLVDMIDLLGQRDIHFESLTESINTQSPSGTLIFHIIAALAQFERALISERTRAGLAAAKNRGVRVGRPRSLTEYQAS QAIRLLSERSIAAVAKEFGVHPQTLRRLWAIHKRHTESAGEFNESSTSPCVKDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| res | AGF34985.1 | resolvase | Not tested | SGI1 | Protein | 3e-36 | 53 |
| res | AGF35025.1 | resolvase | Not tested | SGI1 | Protein | 3e-36 | 53 |
| res | AGF35059.1 | resolvase | Not tested | SGI1 | Protein | 3e-36 | 53 |
| res | AGK06929.1 | resolvase | Not tested | SGI1 | Protein | 3e-36 | 53 |
| res | AGK06966.1 | resolvase | Not tested | SGI1 | Protein | 3e-36 | 53 |
| res | AGK07012.1 | resolvase | Not tested | SGI1 | Protein | 3e-36 | 53 |
| res | AGK07070.1 | resolvase | Not tested | SGI1 | Protein | 3e-36 | 53 |
| res | AAK02044.1 | resolvase | Not tested | SGI1 | Protein | 3e-36 | 53 |
| tnpR | ACD85600.1 | TnpR resolvase | Not tested | SGI2 | Protein | 3e-36 | 53 |
| CDBH8_0918 | YP_005160010.1 | transposase-like protein | Not tested | Not named | Protein | 4e-29 | 50 |
| binR | YP_254224.1 | resolvase/integrase BinR | Not tested | ¥ðSh1 | Protein | 1e-30 | 47 |
| SH1761 | YP_253676.1 | DNA-invertase | Not tested | ¥ÕSh1 | Protein | 1e-30 | 47 |
| binL | YP_254524.1 | DNA-invertase | Not tested | ¥ðSh2 | Protein | 1e-30 | 47 |
| ABTW07_3871 | YP_005797119.1 | resolvase IS26 | Not tested | AbaR4e | Protein | 1e-25 | 47 |
| 1_318 | CAJ77076.1 | Resolvase | Not tested | AbaR1 | Protein | 7e-26 | 47 |
| tnpR | ACN81015.1 | TnpR resolvase | Not tested | AbaR5 | Protein | 1e-25 | 47 |
| tnpR | AAL08439.1 | resolvase TnpR | Not tested | SRL | Protein | 4e-18 | 41 |
| tnpR | YP_006098373.1 | transposon Tn21 resolvase | Not tested | Tn2411 | Protein | 5e-18 | 41 |
| tnpR | AFV53121.1 | Tn21 resolvase | Not tested | AbGRI2-1 | Protein | 4e-18 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| GBP346_A2075 | YP_002896778.1 | recombinase | VFG1030 | Protein | 2e-18 | 41 |
