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Name : GBP346_A2019 (GBP346_A2019) Accession : YP_002896722.1 Strain : Burkholderia pseudomallei MSHR346 Genome accession: NC_012695 Putative virulence/resistance : Unknown Product : glycine betaine/carnitine/choline transport ATP-binding protein opuCA Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1125 EC number : - Position : 1967687 - 1968625 bp Length : 939 bp Strand : - Note : identified by match to protein family HMM PF00005 DNA sequence : ATGATCGAGATCGAACGCGTGAGCCGGCTGTTCGGCGACCTCGCCGCGGTCGACGACGTGTCGCTCGCGGTCGCGCGCGG CACGGTGACGGCGCTCGTCGGCGCATCCGGCAGCGGCAAGTCGACGCTGCTGCGGATGATCAACCGGCTGATCGCGCCGA CGAGCGGGACGATTCGCGTCGACGGCGTCGACACCGCAAGCGTGCCCGCCGAGACGCTGCGGCGCGGAATCGGCTATGTG ATCCAGGGGCACGGGCTCTTTCCGCACTGGACGGTCGCGCGCAACGTCGCGACCGTGCCGCGCCTGCTCGGCTGGCGCGC GGCGCGCGTCGACGCGCGGGTGCGCGAGCTGCTCGAGCTGTTCGAGCTCGATTACGACACGTACGCGCGCAAGCTGCCGC ATCAGTTGTCGGGCGGCCAGCAGCAGCGCGTCGGCGTCGCGCGCGCGCTCGCGGCCGAGCCCGCGATCCTGCTGATGGAC GAGCCGTTCGGCGCGCTCGACCCGATCATCCGCGGCAAGGCGCAGGACGATCTCGTCGCGCTGCAGCGGCGGCTCGGGAT CACGGTCGTGATCGTCACGCACGACATCGACGAAGCGCTGCGGCTCGGCGACCAGATCGCGGTGATGGACGCCGGGCGCA TCCTGCAGGCGGGCTCGCCCGCCGAGATTCTCGGCCGGCCGCAGCCGGGCGTCGTCGAGCGGCTCGTCGCGGGGCTCGAT CGGCCGCTGCGCCTGCTCGCGCTCACGCGCGTCGACGCGCTCGCCGAGCCCGGCGCGGCGCCCGGCGAGCCGATATCGGG CGCGCTCACGCTGCGCGACGCGATCTCCGAGCTGTTGTGGCGCGGCGCGCGCGCGCTGCCCGTATCGAGCGCCGACGGCG CGGCGGCAAGGCGCATCACGCTCGATGCGATCGTCGCGCAGGCGAAGCGGCCGGCATGA Protein sequence : MIEIERVSRLFGDLAAVDDVSLAVARGTVTALVGASGSGKSTLLRMINRLIAPTSGTIRVDGVDTASVPAETLRRGIGYV IQGHGLFPHWTVARNVATVPRLLGWRAARVDARVRELLELFELDYDTYARKLPHQLSGGQQQRVGVARALAAEPAILLMD EPFGALDPIIRGKAQDDLVALQRRLGITVVIVTHDIDEALRLGDQIAVMDAGRILQAGSPAEILGRPQPGVVERLVAGLD RPLRLLALTRVDALAEPGAAPGEPISGALTLRDAISELLWRGARALPVSSADGAAARRITLDAIVAQAKRPA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 1e-47 | 50 |
| opuBA | NP_938494.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 8e-48 | 50 |
