Gene Information

Name : GBP346_A1959 (GBP346_A1959)
Accession : YP_002896664.1
Strain : Burkholderia pseudomallei MSHR346
Genome accession: NC_012695
Putative virulence/resistance : Virulence
Product : ferric enterobactin transport ATP-binding protein FepC
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1896211 - 1897101 bp
Length : 891 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGAACAACGAAACGGTGGCGGCGCTCGCGGCGCGCGCGTTGAGCGTCGGCTACCGGGATCACCGGGTGCTCGACGGCCT
CGATCTGACGATCGCGGCGGGGCGCGTGACCGCGCTGTGCGGCCCGAACGGCTGCGGCAAGAGCACGCTGCTGCGCACGC
TCGCGGGGTTGCAGCCCGCGCTGTCGGGCACGGTCGACGTCAACGGCGCGCCGCTCGGTTCATACCGGCGGCGCGCGCTC
GCGCGCACGCTGACGATGCTCGCGCAGTTCAACCAGATTCCCGCGGGGCTCACGGTGCGCGAGCTCGTCGCGTACGGCCG
CTACGCGCACGGCGGCTGGCTGCGCGGGCTCGCGCGCGCGGACCGCGACGCGATCGACGAGGCGCTCGCGGCGACGGGCC
TCGAACCCGACGCGGCGCGCGACGTGGCCGCGCTGTCGGGCGGCGAGCGGCAGCGCGCCTGGATCGCGATGGCGCTCGCG
CAGCAGGCGCCCATCGTGCTGCTCGACGAGCCGACCACTTATCTCGACATCCATCACCAGCTCGACATCCTGCGCGAGCT
GCGGCGGCTCAATCGCGCGCGCGGGCTCACGATCGTCTGGGTGCTGCACGACCTCAACCAGGCGGCCGCGTACAGCGACG
AGATCGTGCTGATGCGCGCCGGGCGGATCGTCGCGCAGGGCACGCCCGATGCGATGCTCGAGCCGCGTCACCTGCAGGCG
GCGTTCGGCGTGACGATGCTCAAGACCGCGCATCCGCTCACGGGCGCGCCGATGTGCGTGCCGGCGTACGAGGGCGTGCT
CGATACCGATCATGCCGATCCGGCGCACGCGGCCGCGCCCGGGGTGCGCGGCGCGGCCGTCGCGCGCGCGCGTCGGGATC
TCGCCGCATGA

Protein sequence : 
MNNETVAALAARALSVGYRDHRVLDGLDLTIAAGRVTALCGPNGCGKSTLLRTLAGLQPALSGTVDVNGAPLGSYRRRAL
ARTLTMLAQFNQIPAGLTVRELVAYGRYAHGGWLRGLARADRDAIDEALAATGLEPDAARDVAALSGGERQRAWIAMALA
QQAPIVLLDEPTTYLDIHHQLDILRELRRLNRARGLTIVWVLHDLNQAAAYSDEIVLMRAGRIVAQGTPDAMLEPRHLQA
AFGVTMLKTAHPLTGAPMCVPAYEGVLDTDHADPAHAAAPGVRGAAVARARRDLAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 4e-45 45
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-47 44
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-46 44
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-46 44
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-46 44
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-46 44
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-40 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GBP346_A1959 YP_002896664.1 ferric enterobactin transport ATP-binding protein FepC BAC0164 Protein 3e-45 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GBP346_A1959 YP_002896664.1 ferric enterobactin transport ATP-binding protein FepC VFG1042 Protein 3e-45 45
GBP346_A1959 YP_002896664.1 ferric enterobactin transport ATP-binding protein FepC VFG0925 Protein 4e-45 45