|
Name : thiC (GBP346_A1419) Accession : YP_002896133.1 Strain : Burkholderia pseudomallei MSHR346 Genome accession: NC_012695 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 1371008 - 1372939 bp Length : 1932 bp Strand : - Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGAACGCCAACCCCAAGTTCCTGTCGGCCGACGCCCGCGTCGACGCCGCCGCCGTCGCCCCGCTGCCGAATTCGCGCAA GGTCTACGTGACGGGCTCGCAACCCGACATCCGCGTGCCGATGCGTGAGATCACGCAGGCCGATACGCCGACGAGCTTCG GCGGCGAAAAGAACCCGCCGATCTACGTCTACGACACGTCGGGCCCGTACACGGACCCGGACGCGAAGATCGACATTCGC GCGGGCCTGCCCGCGCTGCGCCAGCGCTGGATCGACGCGCGCGGCGACACCGAGACGCTCGCGGGCCTCACGAGCGACTA CGGCCGCGAGCGCGCGGCCGATCCGGCGACAGCCGAGCTGCGCTTTCCCGGCCTGCACCGCCATCCGCGCCGCGCGAAGG CGGGCAAGAACGTCACGCAGATGCACTACGCGCGCCAGGGCATCATCACGCCGGAAATGGAATACATCGCGATCCGCGAG AACCAGCGCCGCGCCGAGTATCTGGAAAGCCTGAAGGCAAGCGGCCCGAACGGCGCGAAGCTCGCCGCGATGATGGGCCG CCAGCACGCGGGCCAGGCATTCGGCGCCGCCGCGTTCGGCGCGAACGCGCCGGCCGAGATCACGCCGGAGTTCGTGCGCG ACGAAGTCGCGCGCGGCCGCGCGATCATCCCGGCGAACATCAACCACCCGGAAACCGAGCCGATGATCATCGGCCGCAAC TTCCTCGTGAAGATCAACGCGAACATCGGCAATTCGGCCGTCACGTCGTCGATCGGCGAGGAAGTCGACAAGATGACGTG GGCGATCCGCTGGGGCGGCGATACGGTGATGGATCTGTCGACCGGCAAGCACATCCATGAAACGCGCGAGTGGATCATCC GCAACAGCCCGGTGCCGATCGGCACGGTGCCGATCTACCAGGCGCTGGAGAAAGTCAACGGCAAAGCCGAGGACCTGACC TGGGAAATCTTCCGCGACACGCTGATCGAGCAGGCCGAGCAAGGCGTCGACTACTTCACGATCCACGCGGGCGTGCGCCT GCAATACGTGCCGCTCACCGCGAACCGGATGACGGGCATCGTGTCGCGCGGCGGCTCGATCATGGCGAAGTGGTGCCTCG CGCACCACAAGGAAAGCTTCCTGTACGAACACTTCGAAGAGATCTGCGAGATCATGAAGGCGTACGACGTGAGCTTCTCG CTCGGCGACGGCCTGCGCCCCGGCTCGATCTACGACGCGAACGACGAAGCGCAGCTCGGCGAACTGAAGACGCTCGGCGA GCTCACGCAGATCGCGTGGAAGCACGACGTGCAGGTGATGATCGAAGGCCCCGGCCACGTGCCGATGCAGTTGATCAAGG AGAACATGGATCTTCAGCTCGACTGGTGCAAGGAAGCGCCGTTCTACACGCTCGGGCCGCTGACCACCGACATCGCGCCG GGCTACGACCACATCACGTCGGGCATCGGCGCCGCGATGATCGGCTGGTTCGGCACCGCGATGCTGTGCTACGTGACGCC GAAGGAGCACCTCGGGCTGCCGAACAAGGACGACGTGAAGGAAGGCATCATCACGTACAAGCTCGCCGCGCACGCGGCCG ACCTGGCGAAGGGCCACCCGGGCGCGCAGGTACGCGACAACGCGCTGTCGAAGGCGCGCTTCGAGTTCCGCTGGCAAGAC CAGTTCAACCTGGGGCTCGACCCGGACAAGGCGCGAGAATTCCACGACGAAACGCTGCCGAAGGATTCGGCGAAGGTCGC GCATTTCTGCTCGATGTGCGGCCCGCACTTCTGCTCGATGAAGATCACGCAGGACGTGCGCGAGTTCGCCGCTCAGCAGG GCGTGTCGGAAAACGACGCGCTGAAGAAGGGGATGGAAGTGAAGGCGGTCGAGTTCGTGAAGAGCGGCTCGGAGATCTAT CACCGCCAGTGA Protein sequence : MNANPKFLSADARVDAAAVAPLPNSRKVYVTGSQPDIRVPMREITQADTPTSFGGEKNPPIYVYDTSGPYTDPDAKIDIR AGLPALRQRWIDARGDTETLAGLTSDYGRERAADPATAELRFPGLHRHPRRAKAGKNVTQMHYARQGIITPEMEYIAIRE NQRRAEYLESLKASGPNGAKLAAMMGRQHAGQAFGAAAFGANAPAEITPEFVRDEVARGRAIIPANINHPETEPMIIGRN FLVKINANIGNSAVTSSIGEEVDKMTWAIRWGGDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVNGKAEDLT WEIFRDTLIEQAEQGVDYFTIHAGVRLQYVPLTANRMTGIVSRGGSIMAKWCLAHHKESFLYEHFEEICEIMKAYDVSFS LGDGLRPGSIYDANDEAQLGELKTLGELTQIAWKHDVQVMIEGPGHVPMQLIKENMDLQLDWCKEAPFYTLGPLTTDIAP GYDHITSGIGAAMIGWFGTAMLCYVTPKEHLGLPNKDDVKEGIITYKLAAHAADLAKGHPGAQVRDNALSKARFEFRWQD QFNLGLDPDKAREFHDETLPKDSAKVAHFCSMCGPHFCSMKITQDVREFAAQQGVSENDALKKGMEVKAVEFVKSGSEIY HRQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 75 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 75 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 74 |
