|
Name : GBP346_A1222 (GBP346_A1222) Accession : YP_002895943.1 Strain : Burkholderia pseudomallei MSHR346 Genome accession: NC_012695 Putative virulence/resistance : Unknown Product : glutamyl-Q tRNA(Asp) synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0008 EC number : 6.1.1.- Position : 1177565 - 1178458 bp Length : 894 bp Strand : - Note : this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the DNA sequence : ATGACACGCTATCGCGGGCGCTTCGCGCCGTCGCCCACCGGCCCCCTGCACTTCGGCTCGCTCGTCGGCGCGCTCGCGAG CTGGCTCGACGCGCGCGCGTGGGGCGGCGCGTGGCTCGTGCGAATCGAGGATATCGACGGCCCGCGCACGGTGCCCGGCG CGGCCGAAGACATGCTCGCGACGCTGCGCGGCTTCGGCTTCATCGCCGACGAGCCGCCCGTCTGGCAAAGCGCGCGCGTC GCGCACTACGAAGCGGCGCTCGCGCGGCTCACCGCCGCGGGGCTCGTCTATCCGTGCGGCTGCTCGCGCAAGGAGATCGC CGATTCGCTGCGCGCCGCGCACGAGCGGCACACGACGCTCGCGTATCCCGGCACGTGCCGCACGGGCCTGCACGGCAAGC CCGCGCGCGCATGGCGCTTGCGCGTGCCGGACGGCGCCGCGGCCGTCGTCGCGTTCGACGACCGCTGGCAGCGCGCGCAA ACGCAGAATCTCGCGACCGAAGTCGGCGATTTCGTGCTGAAGCGCGCGGACGGACAATGGGCGTATCAACTCGCCGTCGT CGTCGACGACGGCGATGCGAACATCACGCACGTCGTGCGCGGCGCCGATCTGCTCGACTCGACCGCTCGCCAGATCTACC TGCAGCGCTGCCTCGGGCTGCCGACGCCGCGCTATCTGCACGTGCCTGTCGTCCTCGACGCGAACGGCGAGAAGCTCAGC AAGCAAACGGGCGCGGCGGCGCTCGATCCCGCCGCGCCGCTGCCGGCGCTCGCCGCCGCCGCGCGGCACCTGGGGCTCGC GCTCGACGGCGCGGCGTGCGCGTCGCTCGACGCGTTCCAGGCGGCCGCGATCGCCGCGTGGGACACGCGCTTCGGGCCGA ACGCGCGCGGCTGA Protein sequence : MTRYRGRFAPSPTGPLHFGSLVGALASWLDARAWGGAWLVRIEDIDGPRTVPGAAEDMLATLRGFGFIADEPPVWQSARV AHYEAALARLTAAGLVYPCGCSRKEIADSLRAAHERHTTLAYPGTCRTGLHGKPARAWRLRVPDGAAAVVAFDDRWQRAQ TQNLATEVGDFVLKRADGQWAYQLAVVVDDGDANITHVVRGADLLDSTARQIYLQRCLGLPTPRYLHVPVVLDANGEKLS KQTGAAALDPAAPLPALAAAARHLGLALDGAACASLDAFQAAAIAAWDTRFGPNARG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00313 | YP_008207778.1 | Glutamyl- and glutaminyl-tRNA synthetase | Not tested | AbaR25 | Protein | 3e-50 | 50 |
| BJAB0868_00317 | YP_008211643.1 | Glutamyl- and glutaminyl-tRNA synthetase | Not tested | AbaR26 | Protein | 3e-50 | 50 |
