Gene Information

Name : Tola_0956 (Tola_0956)
Accession : YP_002892170.1
Strain : Tolumonas auensis DSM 9187
Genome accession: NC_012691
Putative virulence/resistance : Virulence
Product : Fis family sigma-54 specific transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 1039054 - 1040415 bp
Length : 1362 bp
Strand : +
Note : PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: azo:azo3031 transcriptional regulatory protein

DNA sequence : 
ATGGACGTACGCGAACTGATATGTCTGCGGACCGCCGGCGTGTGGAATATGCCAGAAGTGGCACTTGCAGCAGGATGGCT
GTCATGCCCGGTGTGTACCGTAAGTGAGGCAATGGAACTGTATAAGAGGAAGCATCCTCTTGTCGGCCTTATTCTGCTTG
ATAAATTAGGTATCGATGACAAGACTGACCGGGAAATGGAGTTATTGCTGGCACAGACCAGTAGTGATATGGCATGGATT
GGTTTAGTCCCTCCCGGAATGATGACACAACCCGCTATCAGCGATTTACTGGCCAAATATCTGTATGACTATCATACCTT
ACCGGTAGATGATTCCCGGTTACTGACGGCGCTGGGTCACGCTTATGGCATGGCTACTCTGCGCGCTGAACCGCCTCTGC
ATTGCAAAATGGTAGCGACCGGACGGGGATGTATGATTGGTAACAGTCTTTCCATGCGTAAGGTATTTCACCAATTAGAA
AAAATGGCGTCAGTCGATTCATATGTCATGCTGGTGGGGGAAAGTGGCACCGGCAAGGAGTTGGCTGCTCACATCATTTA
TCAGCGCTCATGTCGCCGGAGCGGTCCCTTTATTGCGGTAAATTGCGGTGCCATCCCGGCTAACCTGATTCAGTCTGAAT
TATTTGGTCATGAAAAAGGTTCTTTCACCGGTGCTTTTCGACGCCATATGGGGCATATCGAAGCGGCTCATGGCGGTACG
CTGTTTCTGGATGAAATTGGCGATCTGCCGTTGGAGTTACAGGTCAATTTGCTGCGTTTCCTGCAGGAGAAAAAGATCAC
CCGGGTGGGCGGCACGGAACTGATTCCGGTCGATGTGCGGGTTATTTCTGCTACCAACAGAGATCTACGCGAGGACATCC
GGAGCGGCCGTTTTCGTCAGGACCTTTTCTTTCGTCTCTGTGTGCTGGATCTGGAACTGCCACCACTCAGAGAGCGGGGA
GAGGATATTGAACTGCTGGCCAACCATTTCCTGTGCAGCATGAGAGCAGGACTCAATCCGCTGGTGCGGAGTTTCAGTCC
ATCGGCACTGCACCTGATGCGCAGCTATCACTGGCCGGGTAATGTCCGTGAGCTGAAAAACCGAGTCGCGCGGGCGCTGG
TGATGTGTGAAAAACGGGTGATCTGCCCGCAGGATCTGGAACTGGATTCTGAATCTCCGTTTCCTGATCTTCTGATTCAG
AGCACGACGCTGGCAGAGGCACGGGCGGAAGTTGATAAACTGGTGACACAACGCGCTTTGCAATCCAGTGGTAACAATGT
CATGGTCGCCGCGCGTCAATTGGGGGTATCGCGGGTGACTTTGTACCGGCTGATGGAAAAGTACAAGCTGTTGCTTCCCT
GA

Protein sequence : 
MDVRELICLRTAGVWNMPEVALAAGWLSCPVCTVSEAMELYKRKHPLVGLILLDKLGIDDKTDREMELLLAQTSSDMAWI
GLVPPGMMTQPAISDLLAKYLYDYHTLPVDDSRLLTALGHAYGMATLRAEPPLHCKMVATGRGCMIGNSLSMRKVFHQLE
KMASVDSYVMLVGESGTGKELAAHIIYQRSCRRSGPFIAVNCGAIPANLIQSELFGHEKGSFTGAFRRHMGHIEAAHGGT
LFLDEIGDLPLELQVNLLRFLQEKKITRVGGTELIPVDVRVISATNRDLREDIRSGRFRQDLFFRLCVLDLELPPLRERG
EDIELLANHFLCSMRAGLNPLVRSFSPSALHLMRSYHWPGNVRELKNRVARALVMCEKRVICPQDLELDSESPFPDLLIQ
STTLAEARAEVDKLVTQRALQSSGNNVMVAARQLGVSRVTLYRLMEKYKLLLP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 3e-53 41
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 3e-53 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tola_0956 YP_002892170.1 Fis family sigma-54 specific transcriptional regulator BAC0467 Protein 1e-62 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tola_0956 YP_002892170.1 Fis family sigma-54 specific transcriptional regulator VFG1214 Protein 3e-55 41