|
Name : Tola_0514 (Tola_0514) Accession : YP_002891729.1 Strain : Tolumonas auensis DSM 9187 Genome accession: NC_012691 Putative virulence/resistance : Unknown Product : RNA binding S1 domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 579785 - 582088 bp Length : 2304 bp Strand : - Note : PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; RNA binding S1 domain protein; KEGG: aha:AHA_0303 S1 RNA-binding domain-containing protein DNA sequence : ATGCCTTCAATTAATCAGATCATTGCTGATGAATTAAATGCCCGCAATGAGCAGGTGGCCGCAGCAGTACAGTTACTGGA TGACGGCGCAACCGTCCCTTTTATCGCCCGCTATCGTAAAGAGGCAACCGGCGGATTAGATGACACCCAATTACGTTATT TAGAGCAACGCTTAAGTTATTTGCGGGAAATGGAAGACCGACGTCAGACTATCCTTTCATCTATCAGTGAACAGGGAAAA CTCACTGATGAATTAAAAGCCGATATTCTGGCGGCAGATACCAAGACCCGGCTGGAAGATCTGTACCTGCCTTACAAACC GAAACGTCGCACCAAAGGACAGATCGCGATTGAAGCCGGTCTGGAGCCTTTGGCCGAGCGTTTATTTGCCAATCCGGAAT TAAATCCGGAGCAGGAAGCACTGCAATATCTCAATCCGGAATATCAGATCAATGACAGCAAAGCCGCGCTGGATGGTGCC CGTTATATTCTGATGGAACGTTTTGCCGAAGAAGCCGGCCTGCTGGAGAAACTGCGTAGTTATCTGTGGCATTCCGCCTT ACTGCGCTCGCAGGTCATTGAAGGCAAACAGGCTGAAGGCGCCAAATTCAGCGACTACTTCGATCATCAGGAACCGATCG CTAAAGTCCCGTCTCACCGCACACTGGCTATGCTGCGCGGTCGTAACGAAGGCTTTCTGGCGTTGAATCTGCAGGTGGAA CAGACGGGGGATATTCACCCCTGTGAACAGATGGTTGCCAGCCACTTTGAATTAACGTTCCGTGGCCGTCCTGCCGATAA ATGGCTGCAGAGCGTGGTGAACTGGACCTGGAAAATCAAACTTTCATTGCAGATGGAAACCGAGCTGATTGGTCGTCTGC GTGATGCAGCCGAAACAGAGGCAATCCGTGTCTTTGCCAGTAACCTGAAAGATCTGCTGATGGCGGCACCGGCCGGTATG AAAGCAACCATGGGACTGGATCCGGGGATCCGTACCGGGGTCAAAGTCGCTGTCGTTGATGAAACCAGTAAAGTAGTGGC AGTGCATACCGTTTATCCGTTTGAACCGAAGCGTCAGTATGATCAGGCGATCGAAATTCTGTATGCCCTGTGTGAGCAAT TTAAGGTTGGGTTGATCAGTATCGGTAACGGCACGGCATCACGGGAAACCGATCGTCTGGTCGCTGATATGCTGCACCGC CACCCGACCTGCAAAGCGCAGAAAGTGGTGGTCAGTGAAGCCGGCGCCTCTGTCTATTCAGCTTCAGAATTAGCAGCACT GGAATTCCCGCAGCTGGATGTGTCGCTGCGCGGTGCGGTTTCGATTGCCCGTCGTCTGCAAGATCCGTTGGCCGAGCTGG TAAAAATCGAGCCGAAGGCCATCGGGGTCGGACAATACCAGCATGATGTCAGTCAGAATCAGCTGGCTCACAATCTCGAT ACCGTTGTAGAGGATTGCGTTAACGCCGTCGGTGTGGACGTCAATACCGCATCGGTGCCACTGCTGACACGTGTTTCCGG TTTAAGTAAAACACTGGCGCAGAATATCGTCAGCTATCGTGATGAAAACGGTGCATTTCAGGAACGTCGCGAGTTACTGA AGGTTGCCCGGCTGGGCCCGAAAGCCTATGAGCAGTGCGCCGGCTTCCTGCGTATCCGCGACGGTAAAAATCCGCTGGAT GCTTCGTCTGTTCACCCGGAAGCCTACCCGGTTGTGGAAAAGATCATCCGGCAACTGCACAAACCCGTCGCCGAACTGAT CGGTAACAGCAGCTTGCTGAGAGCACTGAAACCGGCGGATTACACCGATGACCATTTCGGTATTCCGACAGTGACCGATA TTCTGCAGGAGCTGGATAAACCGGGACGCGATCCACGGCCGGAATTCAAAACAGCCACCTTCCGTGAAGGTGTCGAAGAG TTGAAAGACCTCAAGCCCGATATGATTCTGGAAGGTGTTGTTACAAACGTCACCAATTTTGGTGCATTTGTCGACATTGG CGTACATCAGGATGGTTTGGTACATATTTCCGCCATCACGAACCGCTACATTTCTGATCCGCGGGAAGTCGTTAAAGCCG GTGATATCGTGAAAGTGAAAGTGCTGGAAGTGGATATTCCGCGCAAGCGCATTGCACTGACCATGCGTCTGGATGATGAA GCAAGCAGAGACAAACCACATCATCCGAAAGAGCAGCATGAACCGCATCGCAAACCGGCTCACCGGCATACTCATGACAA AAAACCTGCCGATAGTGGCAATAACGCCTTTGCTGCAGCGTTTGCCAATGCAAAGCGCAAATAA Protein sequence : MPSINQIIADELNARNEQVAAAVQLLDDGATVPFIARYRKEATGGLDDTQLRYLEQRLSYLREMEDRRQTILSSISEQGK LTDELKADILAADTKTRLEDLYLPYKPKRRTKGQIAIEAGLEPLAERLFANPELNPEQEALQYLNPEYQINDSKAALDGA RYILMERFAEEAGLLEKLRSYLWHSALLRSQVIEGKQAEGAKFSDYFDHQEPIAKVPSHRTLAMLRGRNEGFLALNLQVE QTGDIHPCEQMVASHFELTFRGRPADKWLQSVVNWTWKIKLSLQMETELIGRLRDAAETEAIRVFASNLKDLLMAAPAGM KATMGLDPGIRTGVKVAVVDETSKVVAVHTVYPFEPKRQYDQAIEILYALCEQFKVGLISIGNGTASRETDRLVADMLHR HPTCKAQKVVVSEAGASVYSASELAALEFPQLDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVSQNQLAHNLD TVVEDCVNAVGVDVNTASVPLLTRVSGLSKTLAQNIVSYRDENGAFQERRELLKVARLGPKAYEQCAGFLRIRDGKNPLD ASSVHPEAYPVVEKIIRQLHKPVAELIGNSSLLRALKPADYTDDHFGIPTVTDILQELDKPGRDPRPEFKTATFREGVEE LKDLKPDMILEGVVTNVTNFGAFVDIGVHQDGLVHISAITNRYISDPREVVKAGDIVKVKVLEVDIPRKRIALTMRLDDE ASRDKPHHPKEQHEPHRKPAHRHTHDKKPADSGNNAFAAAFANAKRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 64 |
