Gene Information

Name : Tola_0342 (Tola_0342)
Accession : YP_002891558.1
Strain : Tolumonas auensis DSM 9187
Genome accession: NC_012691
Putative virulence/resistance : Unknown
Product : type VI secretion system effector
Function : -
COG functional category : S : Function unknown
COG ID : COG3157
EC number : -
Position : 385297 - 385815 bp
Length : 519 bp
Strand : -
Note : TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: vfm:VFMJ11_A1070 hemolysin co-regulated protein

DNA sequence :
ATGCCAACTCCCGCGTATATGACTATCAATGGTGAAAAACAAGGTCTGATCACTGCCGGTACTTTTACCGAAGCCTCTGT
CGGTAACATCTATCAGGAAGGTCATGAAGATGAAGTGATGGTTCAGGGTTTTGAACATCAGGTCGTTCTGCCACGTGATC
CGCAATCAGGCCAGCCATCCGGTCAACGCGTTCATAAACCAGTAAAAATCACCAAAGTTTTCGATAAATGCTCCCCGTTG
ATTTACAACTCACTGACCTCCGGTGAGCGTCTGCCCAGCGTGAAAATCAAATGGTACCGGACTTCAGCGGCAGGTACTCA
GGAGCATTACTTCACGACTGAACTGACTGATGCCATCGTGGTTGACGTGCAGGCCAGCATGCCAAACTGTCAGGATCCAT
CGCAGGCTCATTTCACTCACCTGGAAGACGTATTCATGACTTACCGGGCAATCAAATGGACACATGAAGTCTCTGGTACT
TCTGGTTCTGATGACTGGCGTTCGCCAACTACAGCCTAA

Protein sequence :
MPTPAYMTINGEKQGLITAGTFTEASVGNIYQEGHEDEVMVQGFEHQVVLPRDPQSGQPSGQRVHKPVKITKVFDKCSPL
IYNSLTSGERLPSVKIKWYRTSAAGTQEHYFTTELTDAIVVDVQASMPNCQDPSQAHFTHLEDVFMTYRAIKWTHEVSGT
SGSDDWRSPTTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec16 YP_851428.1 hypothetical protein Not tested PAI II APEC-O1 Protein 2e-48 61
aec16 AAQ96710.1 Aec16 Not tested AGI-1 Protein 1e-48 61
HH0243 NP_859774.1 hypothetical protein Not tested HHGI1 Protein 2e-42 56