|
Name : Tola_2486 (Tola_2486) Accession : YP_002893666.1 Strain : Tolumonas auensis DSM 9187 Genome accession: NC_012691 Putative virulence/resistance : Unknown Product : integrase family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 2716714 - 2718645 bp Length : 1932 bp Strand : - Note : PFAM: integrase family protein; KEGG: pla:Plav_3466 integrase family protein DNA sequence : ATGGCACTCTCTGATCTGACTGTGCGGCAAGCTAAGGCCGCCGACAAAACCTACAGCATCCCCGACACCGACGGCCTCGG CCTGGTGGTCGCCCCTACCAGCGGCAAGTCGTGGCACCTGCGCTACTACTGGCTCGGCAAACAAAAGCGCATCTCCCTGG GCAACTACCCGGAGATCGGCCTGCGCGAGGCTCGTGCCCTGCGCGACGAGGCCCGGGCGCTGCTGGCCAAGGGCATCAAC CCCCACACCGACCGCAAGCAGAAACGGCATGCGGTCAAACTGGCTTCCGATTACACCTTCAAGGCGGTCTTCGACGCCTG GGTCGAGCATCGCCGCAAGGAACTCAAGGAAGGTCGGCAAAGCACGCTCTCCCAGATCCTCCGTATCTTCGACAAGGACG TGCTGCCCAGCCTTGGGAGGATGTCGATCTACGACATTCGCCGGCCCCAGCTTCTGGGTGTCCTGGCAAGGATCGAGCAG CGCAAGGCCTTCACTACCGCTGAAAAGGTCCGCACCTGGCTGGGACAATTGTTCCGCTATGCTCTGGTCATTGTCGAGGG TATGGAAACCAATCCGGCTACGGACCTGGACGTGGTGGCGGAGCCCAAACCGCCGGTGAACCATAACCCTTACCTGCATC TGCCCGAGCTTCCCGAATTTCTCCAGAAGCTCAGGCTCTACAACCCTCGCGGCTGGCAAACCCAGCTCGGCATCCGGCTG CTGTTCCTGACCGGGGTGCGCACCGGCGAACTGCGGCTGGCGACCCCGGATCAGTTCGACCTCGACCGTGGTCTGTGGAT CATCCCGCCGCAGATCGTCAAGCAGCTTCAGGACGAGATGCGCAAGGCCGGCAAGCGCCCGCAGGATGTGCCGCCCTACA TCGTGCCGCTGTCCCTCCAGGCCATCGAGATCTTGCGCTACCTCCTGGGGGTGATGCGGCCGGCCCAGCAGTACCTGCTG ACGCATCGCAGCGACCTCAAGAAGCGCATCAGCGAGAACACCCTCAACGCCGCCTTGAAACGGATGGGCTACGAGGATCA ACTGACCGGCCACGGCATCCGCGGAACCATCTCTACGGCGCTCAACGAGATCGGCTACCCCAAGATTTGGGTGGACGCGC AGCTTTCGCACTCCGACCCGAACAAGGTGAGTTCGGCCTACAACCACGCCAAGTATGTGGAGCCGCGCCGCCGGATGATG CAGGACTGGGCCGACCGCCTCGACCTGCTCGAACAGGGCCAGGTGGAGGCTGCGAGCGCGCATCTCACCATCCATATCGA AGGGGTGCCGGCAATGGTAGAAGCGGAAGATGCCGCTGCCATCGTCGAGGCTTCCCCTGCAGTCCCCGTCCCGCCTGTGG TGGCTACTCCCATCATCGTGACGCCGAACACCGCCGGGGCCACGTTCCAGCGGCTGTCGCAAGTGCCTCCGCCCCCCACC CGGACGCCAGAGCCGGAAGTGTCCGCGATCCAGCGCGAGCGCGAGGAAATGCTCGCCATCTACGAATCGCCGAACAACCT TCCGGTTCCTCTGTTCGGCAAGCTGGCCGGGAAGTCCAAGGACCAGATCAACCGCGAGTTGAAGGCGGGCAAGCTGCTGT CCATCAGTCTAGGCAACCGGGGGCAGCGTGTTCCCGATTGGCAATTGGTGCCGCTCAAGCACAAGCTGGCTCTGGTGCTC ATGAACCAGTGCCCGGAAGCGGACTCCTGGGAGCTTTACCGCATGCTGACCCGGCCACACCCGGATTTGGGGGATCGCGC GGCCATCGATGTGGTGACACCGACCAATCTGGTCGCAGTCGTCCGAACCATCGCGGGCGATCAGCAGCATGCAGATGCCC CCGAGACTGTCTCGCCGCGGCCTATCCCCGAACAGGTGCGGCAGAGTGTCCGCCGGTTGGTGGATAGCACCGTGGTGCTT GAAGGGGCTTGA Protein sequence : MALSDLTVRQAKAADKTYSIPDTDGLGLVVAPTSGKSWHLRYYWLGKQKRISLGNYPEIGLREARALRDEARALLAKGIN PHTDRKQKRHAVKLASDYTFKAVFDAWVEHRRKELKEGRQSTLSQILRIFDKDVLPSLGRMSIYDIRRPQLLGVLARIEQ RKAFTTAEKVRTWLGQLFRYALVIVEGMETNPATDLDVVAEPKPPVNHNPYLHLPELPEFLQKLRLYNPRGWQTQLGIRL LFLTGVRTGELRLATPDQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQAIEILRYLLGVMRPAQQYLL THRSDLKKRISENTLNAALKRMGYEDQLTGHGIRGTISTALNEIGYPKIWVDAQLSHSDPNKVSSAYNHAKYVEPRRRMM QDWADRLDLLEQGQVEAASAHLTIHIEGVPAMVEAEDAAAIVEASPAVPVPPVVATPIIVTPNTAGATFQRLSQVPPPPT RTPEPEVSAIQREREEMLAIYESPNNLPVPLFGKLAGKSKDQINRELKAGKLLSISLGNRGQRVPDWQLVPLKHKLALVL MNQCPEADSWELYRMLTRPHPDLGDRAAIDVVTPTNLVAVVRTIAGDQQHADAPETVSPRPIPEQVRQSVRRLVDSTVVL EGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| int | AAN62094.1 | putative integrase | Not tested | PAGI-2(C) | Protein | 0.0 | 91 |
| unnamed | AFG30104.1 | Int | Not tested | PAGI-2 | Protein | 0.0 | 82 |
