Gene Information

Name : Tola_2424 (Tola_2424)
Accession : YP_002893605.1
Strain : Tolumonas auensis DSM 9187
Genome accession: NC_012691
Putative virulence/resistance : Unknown
Product : helicase domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG0553
EC number : -
Position : 2647836 - 2650121 bp
Length : 2286 bp
Strand : +
Note : PFAM: helicase domain protein; SMART: DEAD-like helicase; KEGG: net:Neut_0104 helicase domain-containing protein

DNA sequence :
ATGACCATGCAACTCGAAGCGGCCCCCGCCGCACCTTCCATGCCCGCCACGGGCGATCTGTTCAAGCCTGCGGACAGCGA
AAGCGATCTGTCTTTCAGCCTGCAGGATTTCGTCACCGAGTTTGGGGATGAGTTACTCGACTCCCTCAACCGGGCCAACC
CGCCCGTTTACAACGGTGTGCCGCGCGCCAACCGCCAGCTCGTCCTCGCCAGCCTCAAGCGGCAGCTGTTCCCCGCCCAG
GCCGAGGTCGTCCATGCGGCCGCCGAACTGCTCGTCAATCAGGGCGAGCGCGCGGCCATCGTCAATGGCGAGATGGGGAC
GGGGAAAACCACCGTCGGCATCGCGCTAGGGGCGGTGCTCAACGCGGAAGGCTATCGCCGCACGCTCGTCCTCAGCCCGC
CCCATCTTGTCTACAAATGGCGGCGCGAGATCCTCGAAACCGTCGCCGGTGCGAAAGTCTGGGTGCTCAACGGCCCGGAC
ACATTGCTCAAGTTGATCAAGCTGCGCGAGCAGTTGAACGTGCCGGCCGAAGGGCAGGAGTTCTTCATCATCGGCAGGGT
CAGAATGCGGATGGGATTCCACTGGAAGCCCGCCTTCGTCCGCAAACACACCCGTTACGGCATGGTCGGCGCCTGCCCGC
ACTGCGGGACGGTGGTCACTGATCTCGACGGCGAGCCGGTCAATGCTCTGGAGCTGGAGGCGGAAGAAATCCGCCGCAAG
TGCAATGTCTGCGACGGCGCACTCTGGACGCTGATGCGGCCGCGCAGCCTGTCGGGCAGTGATCAGTCCTCGGCGGTGCT
GCGTGCGCTGAAGAGAATCCCGACCATCGGCGAGGCCACGGCCAACAAGCTGATGAAGACCTTCGGCGATTCGTTCCTGG
CGTCGATGCTCGGCGACAACCTGCACAACTTCATCAACCTGATGGACGAGCGCGGGGAGTTGGTGTTTTCCGACCGGCAG
GCGCAGCGCATGGAACGCGCCATGTCCTCAATGGAGTTCGGCTTCGGAGAAGGCGGCTATCAGCCCTCGGAATATGTGAA
GCGGTATCTGCCGCAAAGCACCTTCGACTTGCTCATCGCAGATGAAGCCCATGAATACAAAACGGGTGGATCGGCGCAGG
GCCAGGCGATGGGCGTCATCGCAGCCAAGGCACGCAAGACCGTACTGCTAACCGGTACCCTCATGGGGGGCTATGCAGAC
GATCTCTTTCATTTGCTGTTCCGGGCCTTGCCCGCGAGGATGATCGAAGATGGTTACCGCCCGAGCGCCAGCGGCAGCAT
GAATGCCGCTGCCATGGCGTTTATGAGGGACCATGGTGTCCTCAAGGACATCTATTCCGAGAGCAACGGGCCGGCCCACA
AGACCGCCAAAGGCTCGAAGATCACCGTCAGAACGGTCAAGGCACCCGGGTTCGGGCCGAAAGGCGTACTGCGCTGCGTG
CTGCCGTACACGATCTTCCTCAAGCTCAGAGACATCGGCGGCGTGCTGCCGCCGTATGACGAAGAGTTCCGGGAGGTCGC
CATGGATGCCGGGCAGGCCGACGCCTACCGCAATCTGGCCGCCAGCCTGACGGCGGAACTCAAGGAGGCCCTGCGCAAGC
GGGATACCACCTTGCTGGGCGTAGTCCTCAATGTGCTGTTGGCGTGGTCCGACTGCTGCTTCCGGGCAGAAACCGTGCGC
CACCCGCGTACGCGCCAGGTCCTGGCCTTCACACCGGCCCAGTTCAACGAGCTGGAGATCATGCCGAAAGAGCGTGAGCT
GATCGACATCTGCCGCGAGGAGAAAGCCGCGGGTCGTAAGACCCTGGTGTACTCCGTCTACACCGGCACGCGCGATACCA
CCAGCCGTTTGAAGATGTTGCTGGAGCAAGAGGGTTTTCGGGTGGCGGTACTGCGCGCAAGCGTGGATGCCTCTCGCCGC
GAAGACTGGATTGCCGAGCAGCTCGATCGCGGGATCGACGTCCTCATCACGAATCCGGAACTGGTGAAAACCGGCCTGGA
TTTGCTGGAGTTCCCCACGATTGTGTTCATGCAGTCGGGGTGGAACATCTACACGTTGCAACAAGCCGCGCGCCGGTCAT
GGCGGATCGGCCAGAAGCAGCATGTGAAGGTGATCTACCTGGGGTATGCGGCCACGTCGCAGATGACGTGCTTGGCCCTG
ATGGCGAAGAAGATCCTGGTATCGCAGAGCACCTCCGGCGACGTCCCGGAATCGGGGCTGGATGTGCTCAACCAGGACGG
CGATTCGATCGAGGTCGCCCTGGCCCGGCAACTCGTCGCGGCCTGA

Protein sequence :
MTMQLEAAPAAPSMPATGDLFKPADSESDLSFSLQDFVTEFGDELLDSLNRANPPVYNGVPRANRQLVLASLKRQLFPAQ
AEVVHAAAELLVNQGERAAIVNGEMGTGKTTVGIALGAVLNAEGYRRTLVLSPPHLVYKWRREILETVAGAKVWVLNGPD
TLLKLIKLREQLNVPAEGQEFFIIGRVRMRMGFHWKPAFVRKHTRYGMVGACPHCGTVVTDLDGEPVNALELEAEEIRRK
CNVCDGALWTLMRPRSLSGSDQSSAVLRALKRIPTIGEATANKLMKTFGDSFLASMLGDNLHNFINLMDERGELVFSDRQ
AQRMERAMSSMEFGFGEGGYQPSEYVKRYLPQSTFDLLIADEAHEYKTGGSAQGQAMGVIAAKARKTVLLTGTLMGGYAD
DLFHLLFRALPARMIEDGYRPSASGSMNAAAMAFMRDHGVLKDIYSESNGPAHKTAKGSKITVRTVKAPGFGPKGVLRCV
LPYTIFLKLRDIGGVLPPYDEEFREVAMDAGQADAYRNLAASLTAELKEALRKRDTTLLGVVLNVLLAWSDCCFRAETVR
HPRTRQVLAFTPAQFNELEIMPKERELIDICREEKAAGRKTLVYSVYTGTRDTTSRLKMLLEQEGFRVAVLRASVDASRR
EDWIAEQLDRGIDVLITNPELVKTGLDLLEFPTIVFMQSGWNIYTLQQAARRSWRIGQKQHVKVIYLGYAATSQMTCLAL
MAKKILVSQSTSGDVPESGLDVLNQDGDSIEVALARQLVAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C71 AAN62165.1 conserved hypothetical plasmid protein Not tested PAGI-2(C) Protein 0.0 83
ORF SG81 AAN62302.1 conserved hypothetical plasmid protein Not tested PAGI-3(SG) Protein 0.0 82
unnamed ABR13404.1 putative helicase Not tested PAGI-5 Protein 0.0 69
RL063 AAP84188.1 plasmid related protein Not tested PAPI-1 Protein 0.0 68
pph67 CAI36108.1 superfamily II DNA/RNA helicase Not tested PPHGI-1 Protein 0.0 68
yea AAW83099.1 Yea Not tested GGI Protein 3e-174 49